DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkr and npy2r

DIOPT Version :9

Sequence 1:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_004911210.1 Gene:npy2r / 100498351 XenbaseID:XB-GENE-983413 Length:408 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LkrNP_647968.3 7tm_4 46..329 CDD:304433
7tm_1 52..318 CDD:278431
PHA03216 467..>519 CDD:177558
npy2rXP_004911210.1 7tmA_NPY2R 74..358 CDD:320521
TM helix 1 75..101 CDD:320521
TM helix 2 108..133 CDD:320521
TM helix 3 146..176 CDD:320521
TM helix 4 187..208 CDD:320521
TM helix 5 238..267 CDD:320521
TM helix 6 283..313 CDD:320521
TM helix 7 326..351 CDD:320521
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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