DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkr and npy2r

DIOPT Version :10

Sequence 1:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_004911210.1 Gene:npy2r / 100498351 XenbaseID:XB-GENE-983413 Length:408 Species:Xenopus tropicalis


Alignment Length:390 Identity:106/390 - (27%)
Similarity:178/390 - (45%) Gaps:76/390 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EIVALLSI------FYGGISIVAVIGNTLVIWVVATTRQMRTVTNMYIANLAFADVIIGLFCIPF 91
            :|..|||:      .|..|.::.|:||:|||:||...:.||||||.:|.|||.:|:::...|:||
 Frog    65 DITKLLSVQVVLILAYSSIILLGVLGNSLVIYVVIKFKTMRTVTNFFIVNLAVSDLMVNTLCLPF 129

  Fly    92 QFQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLTAIAIDRHRAIINPLRARPTKFVSKFIIGG 156
            .....||..|.....:|....:.|.|:|.||..||..||:||||.|:..|.::.:..:...|||.
 Frog   130 TLVYTLLDDWKFGTVLCHLVTYSQGLAVQVSTVTLMVIALDRHRCIVYHLESKISTKICFMIIGI 194

  Fly   157 IWMLALLFAVPFAI-----------AFRVEELTERFRENNETYNVTRPFCMNKNLSDDQLQSFRY 210
            .|:.:.|.|.|.||           .|:::..:||:...:..|...                :..
 Frog   195 TWVCSALLASPLAIFKEYSVIVISSDFQIQACSERWPVGDLNYGTI----------------YSI 243

  Fly   211 TLVFVQYLVPFCVISFVYIQMAVRLWGTRAPGNAQDSRDITLLKNKKKVIKMLIIVVIIFGLCWL 275
            :::.:||:||..:||:.||::..:|....:||...|...    :.::|..|||:.||::|.:|||
 Frog   244 SMLLIQYIVPLAIISYAYIRIWTKLKNHVSPGGGNDHYH----QRRRKTTKMLVAVVVVFAVCWL 304

  Fly   276 P---LQLYNILYVTIPEINDYHFISIVWFCCDWLAMSNSCYNPFIYGIYNEKFKREFNKRFAACF 337
            |   .||.:.:...:.::|:|..|..::..   :||.::..||.:||..|..::           
 Frog   305 PFHAFQLASDIDGKVLDLNEYKLIYTIFHV---IAMCSTFANPLLYGWMNNNYR----------- 355

  Fly   338 CKFKTSMDAHERTFSMHTRASSIRSTYANSSMRIRSNLFGPARGGVNNGKPGLHMPRVHGSGANS 402
            ..|.|:....:|..|:|...|.                      .:...|..|.:..::|:..||
 Frog   356 TAFLTAFKCEQRMDSIHPEVSV----------------------AIQLKKKQLEVKEINGTSDNS 398

  Fly   403  402
             Frog   399  398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 94/312 (30%)
TM helix 1 37..63 CDD:320515 13/31 (42%)
TM helix 2 70..95 CDD:320515 10/24 (42%)
TM helix 3 108..138 CDD:320515 14/29 (48%)
TM helix 4 149..170 CDD:320515 7/20 (35%)
TM helix 5 205..234 CDD:320515 8/28 (29%)
TM helix 6 254..284 CDD:320515 13/32 (41%)
TM helix 7 297..322 CDD:320515 6/24 (25%)
npy2rXP_004911210.1 7tmA_NPY2R 74..358 CDD:320521 91/317 (29%)
TM helix 1 75..101 CDD:320521 10/25 (40%)
TM helix 2 108..133 CDD:320521 10/24 (42%)
TM helix 3 146..176 CDD:320521 14/29 (48%)
TM helix 4 187..208 CDD:320521 7/20 (35%)
TM helix 5 238..267 CDD:320521 8/44 (18%)
TM helix 6 283..313 CDD:320521 13/29 (45%)
TM helix 7 326..351 CDD:320521 7/27 (26%)

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