DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkr and XB982628

DIOPT Version :10

Sequence 1:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_002933014.2 Gene:XB982628 / 100493271 XenbaseID:XB-GENE-982629 Length:387 Species:Xenopus tropicalis


Alignment Length:344 Identity:114/344 - (33%)
Similarity:191/344 - (55%) Gaps:34/344 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RLEFLPGAEEEAEFERLY---------AAPAEIVALLSIF-------YGGISIVAVIGNTLVIWV 59
            ::|...|...|.|...:|         :||...|.|:..:       |..:.::.:.||.|:::|
 Frog    38 KMETTIGWSYEPENLTIYMVNKNGSNASAPFTGVQLIQSYKPLFIPCYTLVVLIGIFGNYLLLYV 102

  Fly    60 VATTRQMRTVTNMYIANLAFADVIIGLFCIPFQFQAAL-LQSWNLPWFMCSFCPFVQALSVNVSV 123
            :..||:|..|||.:|.||||:|:::...|:||....|. .|.|....|||.|...:|.::|.|||
 Frog   103 ICRTRKMHNVTNFFIGNLAFSDMLMCATCVPFTLAYAFNPQGWVFGKFMCYFVFLMQPVTVYVSV 167

  Fly   124 FTLTAIAIDRHRAIINPLRARPTKFVSKFIIGGIWMLALLFAVPFAIA--FRVEELTERFRENNE 186
            |||||||:||:.|.::||:.|.:.....:::.|||:|:.....| |||  :.||     |::  |
 Frog   168 FTLTAIAVDRYYATVHPLKKRISVTTCIYVLMGIWLLSCALVGP-AIAHTYHVE-----FQQ--E 224

  Fly   187 TYNVTRPFCMNKNLSDDQLQSFRYTLVFVQYLVPFCVISFVYIQMAVRLWGTRAPGN-AQDSRDI 250
            .:.:...|.|.|   :.:..::.|:.:.:.|::|...:|..||.:.|:|.....||: .|...:.
 Frog   225 GFTICEEFWMGK---ETERLAYAYSTLIITYILPLSAVSLSYICITVKLKNRVVPGHPTQSQAEF 286

  Fly   251 TLLKNKKKVIKMLIIVVIIFGLCWLPLQLYNILY-VTIPEINDYHFISIVWFCCDWLAMSNSCYN 314
            ..|: |:|:.:::::||..||:||||:.::||:. :.|..||.::|:.|..| |.|.|||:||.|
 Frog   287 DRLR-KRKIFRLIVLVVTAFGICWLPIHVFNIIRDIDINLINKHYFLHIQLF-CHWFAMSSSCCN 349

  Fly   315 PFIYGIYNEKFKREFNKRF 333
            ||:|...:::|:.|..|.|
 Frog   350 PFLYAWLHDRFRSELRKMF 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 103/304 (34%)
TM helix 1 37..63 CDD:320515 6/32 (19%)
TM helix 2 70..95 CDD:320515 11/24 (46%)
TM helix 3 108..138 CDD:320515 17/29 (59%)
TM helix 4 149..170 CDD:320515 5/20 (25%)
TM helix 5 205..234 CDD:320515 6/28 (21%)
TM helix 6 254..284 CDD:320515 12/29 (41%)
TM helix 7 297..322 CDD:320515 13/24 (54%)
XB982628XP_002933014.2 7tmA_PrRP_R 79..364 CDD:320516 102/297 (34%)
TM helix 1 80..106 CDD:320516 5/25 (20%)
TM helix 2 113..138 CDD:320516 11/24 (46%)
TM helix 3 152..182 CDD:320516 17/29 (59%)
TM helix 4 193..214 CDD:320516 6/21 (29%)
TM helix 5 240..269 CDD:320516 6/28 (21%)
TM helix 6 289..319 CDD:320516 13/30 (43%)
TM helix 7 332..357 CDD:320516 13/25 (52%)

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