Sequence 1: | NP_647968.3 | Gene: | Lkr / 38622 | FlyBaseID: | FBgn0035610 | Length: | 542 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106489.1 | Gene: | tacr1 / 100127678 | XenbaseID: | XB-GENE-5835469 | Length: | 407 | Species: | Xenopus tropicalis |
Alignment Length: | 396 | Identity: | 121/396 - (30%) |
---|---|---|---|
Similarity: | 186/396 - (46%) | Gaps: | 62/396 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 YAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATTRQMRTVTNMYIANLAFADVIIGLFCIPFQ 92
Fly 93 FQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLTAIAIDRHRAIINPLRARPTKFVSKFIIGGI 157
Fly 158 WMLALLFAVPFAIAFRVEELTER---FRENNETYNVTRPFCMNKNLSDDQLQSFRYTLVFVQYLV 219
Fly 220 PFCVISFVYIQMAVRLWGTRAPGNAQDSRDITLLKNKKKVIKMLIIVVIIFGLCWLPLQLYNILY 284
Fly 285 VTIPEINDYHFISIVWFCCDWLAMSNSCYNPFIYGIYNEKFKREFNKRFAAC------------- 336
Fly 337 ----FCKFKTSM-------------------DAHERTFSMH------TRASSIRS---TYANSSM 369
Fly 370 RIRSNL 375 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lkr | NP_647968.3 | 7tm_4 | 46..329 | CDD:304433 | 94/285 (33%) |
7tm_1 | 52..318 | CDD:278431 | 87/268 (32%) | ||
PHA03216 | 467..>519 | CDD:177558 | |||
tacr1 | NP_001106489.1 | 7tmA_NK1R | 33..315 | CDD:320668 | 100/295 (34%) |
TM helix 1 | 34..60 | CDD:320668 | 12/25 (48%) | ||
TM helix 2 | 67..93 | CDD:320668 | 9/25 (36%) | ||
TM helix 3 | 105..135 | CDD:320668 | 12/29 (41%) | ||
TM helix 4 | 146..167 | CDD:320668 | 6/20 (30%) | ||
TM helix 5 | 193..222 | CDD:320668 | 7/31 (23%) | ||
TM helix 6 | 241..271 | CDD:320668 | 14/29 (48%) | ||
TM helix 7 | 283..308 | CDD:320668 | 9/24 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X257 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |