DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blanks and AT1G01760

DIOPT Version :10

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001322030.1 Gene:AT1G01760 / 839252 AraportID:AT1G01760 Length:433 Species:Arabidopsis thaliana


Alignment Length:158 Identity:33/158 - (20%)
Similarity:61/158 - (38%) Gaps:36/158 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KALSDQITSSMRVTKNKIADDKSSDV--ITDDATNGRKKQKKN---KKAKIRPLTMPVTSKDALM 124
            |..|.|:..|:.|..:.|...:.|||  |..::..|...|..:   :|......|:.|:..|.:.
plant   174 KIPSTQVDDSLLVQASDICSSRHSDVPEIGSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIA 238

  Fly   125 VLNELKGVTVDNMQIKRDHEGKIMARVVVNSKKYEAE---GSSVNSARNAACEKALQEILTTKMK 186
            ..|.| ||           :|.::.:|:  ...|.:.   |.|::|..|.:....|:..|..::.
plant   239 RWNVL-GV-----------QGALLYQVL--QPVYISTITVGQSLHSPDNFSLADHLRRSLYERIL 289

  Fly   187 AVLDGPGKSLESDEDDILEKMASYAIHK 214
            .:.|              |.:.|:.::|
plant   290 PLSD--------------ELLTSFRLNK 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 DSRM_SF 120..180 CDD:444671 13/62 (21%)
DSRM_SF 254..314 CDD:444671
AT1G01760NP_001322030.1 ADEAMc 17..431 CDD:214718 33/158 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.