DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and Adat1

DIOPT Version :9

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001103081.1 Gene:Adat1 / 690810 RGDID:1591020 Length:497 Species:Rattus norvegicus


Alignment Length:159 Identity:34/159 - (21%)
Similarity:54/159 - (33%) Gaps:68/159 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 IKRDHEGK--------IMARVVVNSKKYEAEGSSVNSARNAACEKALQEILTTKMKAVLDGP--- 192
            ||...:||        ::|.||           .:.:..|.||:...::|..|| :.|..|.   
  Rat    16 IKLPKQGKPEPNREWTLLAAVV-----------KIQTPANQACDTPDKQIQVTK-EVVSMGTGTK 68

  Fly   193 --GKSLESDEDDIL----------EKMASYAIHKLGEEWKTDDIDVATLYNDLKNKQTSVVEPKK 245
              |:|...:..|||          .....|.:|:|         .||.:.     |:.|:.    
  Rat    69 CIGQSKMRESGDILNDSHAEVIARRSFQRYILHQL---------HVAAVL-----KEDSIF---- 115

  Fly   246 PLPET----WKNMHPCMVLNYMRPQCTFI 270
             ||.|    |:          :||..:|:
  Rat   116 -LPGTQRGLWR----------LRPDLSFV 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 None
Adat1NP_001103081.1 A_deamin 62..490 CDD:396626 20/101 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352136
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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