DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and adarb1a

DIOPT Version :9

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_571685.2 Gene:adarb1a / 58134 ZFINID:ZDB-GENE-000627-2 Length:720 Species:Danio rerio


Alignment Length:314 Identity:83/314 - (26%)
Similarity:123/314 - (39%) Gaps:67/314 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EPKALSDQITSSMRVTKNKIADDKSSDVITDDA---TNG------RKK--QKKNK---KAKIRPL 113
            |.|.||   |.||.|.:|:..|:.||..:..:.   .||      ||:  ::.||   .:|.||.
Zfish    23 EDKHLS---TCSMDVKENRNLDNLSSKEVLGEGPHLANGSARGLSRKRPLEEGNKGHGHSKFRPK 84

  Fly   114 TM-----PVTSKDALMVLNELKGVTVDNMQIK------RDHEGKIMARVVVNSKKYEAEGSSVNS 167
            ..     |:..|:|||.|||:|    ..:|.|      ..|....:..|.||.:.:|..|.:...
Zfish    85 KRRKPQGPILPKNALMQLNEIK----PGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKK 145

  Fly   168 ARNAACEKALQEIL--TTKMKAVLDGPGKSL------ESDEDDILEKMAS------------YAI 212
            |:..|.||||:..:  ....:|.| ..|::|      .||:.|..:.:.:            |. 
Zfish   146 AKLNAAEKALRSFVQFPNASEAHL-AMGRTLTVNADFTSDQADFPDMLFNGFETPVPPDDPFYL- 208

  Fly   213 HKLGEEWKTDDIDVATLYNDLKNKQTSVVEPKKPL--------PETWKNMHPCMVLNYMRPQCTF 269
             .||.......:....|...||.|.    .|..||        |.|....:..|:||.:||...:
Zfish   209 -SLGSNGSLCSLKEYRLPVTLKYKN----RPHPPLPLAPALTAPPTGSGKNAVMILNELRPGLKY 268

  Fly   270 IVSGGTGTNQNNTFSMSVCVDNCEFNAEGPSKKAARYKLSALVCNKLFGTDYPQ 323
            .....:|.:....|.|||.||..:|...|.:||.|:.:.:....:.||.....|
Zfish   269 EFVAESGESHAKNFIMSVTVDTQKFQGSGRNKKLAKARAAQAALSGLFNMQLDQ 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 None
adarb1aNP_571685.2 DSRM 95..157 CDD:214634 22/65 (34%)
DSRM 254..303 CDD:238007 16/48 (33%)
ADEAMc 341..717 CDD:214718
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593996
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10910
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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