DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blanks and strbp

DIOPT Version :9

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_005155660.1 Gene:strbp / 557957 ZFINID:ZDB-GENE-030729-18 Length:696 Species:Danio rerio


Alignment Length:307 Identity:84/307 - (27%)
Similarity:126/307 - (41%) Gaps:53/307 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EEDAVAVIPLADN-LKKTAMGGENK-SDEKGTVSSEPK---ALSDQITSSM-RVTKNKIADDKSS 88
            :|:|.|:...|.: |:..|.|...| .|.....||:|.   ..||:....: |..::.:.|||  
Zfish   316 DEEAEAITSNAQHALRLMAFGQIYKVLDMDPLPSSKPSQKYPWSDKEGLGLKRPYEDGLMDDK-- 378

  Fly    89 DVITDDATNGRKKQKKN-KKA----KIRPLTMPVTSKDALMVLNELKGVTVDNMQIK-RDHEGKI 147
            |:|        ||.|:| :||    |......|:   :|||.||:::    ..:|.| ....|.:
Zfish   379 DLI--------KKMKRNLRKAVLDSKAIDSNQPM---NALMRLNQIR----PGLQYKLLSQSGPV 428

  Fly   148 MARVV-----VNSKKYEAEGSSVNSARNAACEKALQEI-LTTKMKAVLDGPGKSLESDEDDILEK 206
            .|.|.     |:...|||.|||..:|:.....|.||.: ..|.....||    |:.:||....|.
Zfish   429 HAPVFTMSVDVDGTVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDTDLD----SMSADEKSDGEG 489

  Fly   207 MASYAIHKLGEEWKTDDIDVATLYNDLKNKQTSVVEPKKP-LPETWKNMHPCMVLNYMRPQCTFI 270
            .:..:.|.......:.|           :..|..|..:.| |..:.||  |.|.||..|....:.
Zfish   490 KSESSTHSSNNTTHSSD-----------SSNTLEVRTQGPILTASGKN--PVMELNEKRRGLKYE 541

  Fly   271 VSGGTGTNQNNTFSMSVCVDNCEFNAEGPSKKAARYKLSALVCNKLF 317
            :...:|.:.:..|.|.|.||..:|...||:||.|:...:.....|||
Zfish   542 LISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLF 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 None
strbpXP_005155660.1 DZF 97..350 CDD:128842 9/33 (27%)
DSRM 403..467 CDD:214634 22/70 (31%)
DSRM 525..>571 CDD:214634 15/47 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594008
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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