DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and zfr

DIOPT Version :10

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_012816329.1 Gene:zfr / 496597 XenbaseID:XB-GENE-6067390 Length:1084 Species:Xenopus tropicalis


Alignment Length:237 Identity:47/237 - (19%)
Similarity:95/237 - (40%) Gaps:39/237 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NPSAEEDAVAVIPLADNLKKTAMGGENKSDEKGTVSSEPKALSDQIT----SSMRVTKNKIADDK 86
            |.|:...|...:.|..:....:....:|:....:.|...|..:.:||    :.::.|.||:.|.|
 Frog   451 NGSSSVGASPSVKLLTSSSSLSTSSSSKASSMSSTSIVKKVTTPKITFIGGNKLQSTGNKVDDSK 515

  Fly    87 SSDVITDDATNGRKKQKKNKKAKIRPLTMPVTSKDALMVLNELKGVTVDNMQIKRDHEGKIMARV 151
            .|    |.|........:.::|||.|::....:..||.  ::::.|..|.::..|:.|||:   :
 Frog   516 MS----DSAKTTPSTAAQTQEAKIDPMSEAAQTLAALQ--SDVQPVGHDYVEEVRNDEGKV---I 571

  Fly   152 VVNSKKYEAEGSSVNS--------ARNAACEKALQEILTTKMKAVLDGPGKSLESDEDDILEKMA 208
            ..:.|..|...:..|:        ......:|.:...|..::|..:    ::.:..|:.:.::|.
 Frog   572 RFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSI----RARKIQEEKMRKQMQ 632

  Fly   209 SYAIHKLGEE---WK-----TDDIDVATLYNDLKNKQTSVVE 242
            .....:..||   |:     .|..|.||.:      |:|.|:
 Frog   633 KEEYWRRREEEERWRMEMRNRDSSDQATFF------QSSTVQ 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 DSRM_SF 120..180 CDD:444671 12/67 (18%)
DSRM_SF 254..314 CDD:444671
zfrXP_012816329.1 ZnF_U1 331..360 CDD:197732
C2H2 Zn finger 333..355 CDD:275371
ZnF_U1 384..413 CDD:197732
C2H2 Zn finger 384..406 CDD:275371
ZnF_U1 572..603 CDD:197732 3/30 (10%)
C2H2 Zn finger 575..597 CDD:275371 3/21 (14%)
DZF 794..1048 CDD:128842
Blue background indicates that the domain is not in the aligned region.

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