DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment blanks and stau2

DIOPT Version :9

Sequence 1:	NP_647966.1	Gene:	blanks / 38620	FlyBaseID:	FBgn0035608	Length:	324	Species:	Drosophila melanogaster
Sequence 2:	XP_021325790.1	Gene:	stau2 / 393899	ZFINID:	ZDB-GENE-040426-687	Length:	684	Species:	Danio rerio

Alignment Length:	217	Identity:	45/217 - (20%)
Similarity:	87/217 - (40%)	Gaps:	48/217 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   120 KDALMVLNELKGVTVDNMQIKRDHE-----GKIM-ARVVVNSKKYEAEGSSVNSARNAACEKALQ 178
            |..:.::|||........|.|..:|     .||. .::.:.::.:|:||||:..|:::...|||.
Zfish    79 KTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGNQVWESEGSSIKKAQHSTATKALA 143

  Fly   179 EILTTKMKAVLDGPGKSLESDEDDILEKMASYAIHKLGEEWKTDDIDVATLYNDLKNKQTSVVEP 243
            |      .::...|.:|.::|.:.....:             |..:::..|  .:|..:.::..|
Zfish   144 E------SSLPRPPPRSPKADSNSNPGSI-------------TPTVELNGL--AMKRGEPAIYRP 187

  Fly   244 --KKPLPETWKNMHPCMVLN----YMRPQCTFIVSGGTGTNQNNTFSMSVCVDNCEFNAEGPSKK 302
              .||:|....|.:...:.|    |..|:               .|.:.:.|.|.||..||.:::
Zfish   188 LDPKPIPNYRANYNFRGMFNQRYHYPVPK---------------VFYVQLTVGNNEFIGEGRTRQ 237

  Fly   303 AARYKLSALVCNKLFGTDYPQK 324
            |||:..:......|.....|::
Zfish   238 AARHNAAMKALQALKNEPIPER 259

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
blanks	NP_647966.1	None
stau2	XP_021325790.1	DSRM	81..142	CDD:214634	15/60 (25%)
		DSRM	168..252	CDD:214634	20/100 (20%)
		DSRM	281..345	CDD:214634
		DSRM	380..446	CDD:214634
		Staufen_C	526..631	CDD:318642
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170594036
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930