DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and CG12493

DIOPT Version :10

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_647927.3 Gene:CG12493 / 38575 FlyBaseID:FBgn0035571 Length:296 Species:Drosophila melanogaster


Alignment Length:312 Identity:178/312 - (57%)
Similarity:215/312 - (68%) Gaps:27/312 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EMKKALIPNPSAEEDAVAVIPLADNLKKTAMGGENKSDEKGTVSSEPKALSDQITSSMRVTKNKI 82
            :||..||.|.|.:|||    .::|:||:|||.......|...|.::..::|            ||
  Fly     5 DMKDLLIVNVSDQEDA----GMSDDLKETAMDCNMPDGESSLVITDGDSMS------------KI 53

  Fly    83 ADDKSSDVITDDATNGRKKQKK---NKKAK---IRPLTMPVTSKDALMVLNELKGVTVDNMQIKR 141
            .||.:  :.|.|....:||.||   ::|||   :|||...||||||||||.|||||.:||||||:
  Fly    54 PDDAA--MATSDPKKKKKKVKKLKRSQKAKDRLVRPLPKAVTSKDALMVLKELKGVIIDNMQIKQ 116

  Fly   142 DHEGKIMARVVVNSKKYEAEGSSVNSARNAACEKALQEILTTKMKAVLDGPGKSLESDEDDILEK 206
            |||||.:|.:|||||||:|||||.|||.||||||||:|||||||||:|..|..|...|||:||||
  Fly   117 DHEGKNVANIVVNSKKYDAEGSSENSAGNAACEKALREILTTKMKALLAEPENSSGGDEDNILEK 181

  Fly   207 MASYAIHKLGEEWKTDDIDVATLYNDLKNKQTSVVEPKKPLPETWKNMHPCMVLNYMRPQCTFIV 271
            |.|||::||.|:|.:|.||||.||||:|||:||  .....||:.||||||||||..||||.||..
  Fly   182 MTSYAVYKLAEKWNSDAIDVAALYNDVKNKKTS--SSVGQLPKLWKNMHPCMVLMQMRPQTTFKF 244

  Fly   272 SGGTGTNQNNTFSMSVCVDNCEFNAEGPSKKAARYKLSALVCNKLFGTDYPQ 323
            .|.:|.|: ..|||.|.||||||.|:||:||.||.|::||||||||||||||
  Fly   245 LGSSGENR-KVFSMGVSVDNCEFKADGPTKKDARRKVAALVCNKLFGTDYPQ 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 DSRM_SF 120..180 CDD:444671 47/59 (80%)
DSRM_SF 254..314 CDD:444671 37/59 (63%)
CG12493NP_647927.3 DSRM_SF 95..155 CDD:444671 47/59 (80%)
DSRM_SF 227..284 CDD:444671 35/57 (61%)

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