Protein Alignment blanks and tarbp2

DIOPT Version :9

• Sequence 1: NP_647966.1
• Gene: blanks / 38620
• FlyBaseID: FBgn0035608
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_956291.1
• Gene: tarbp2 / 336141
• ZFINID: ZDB-GENE-030131-8085
• Length: 346
• Species: Danio rerio
• Alignment Length: 249
• Identity: 54/249 - (21%)
• Similarity: 88/249 - (35%)
• Gaps: 52/249 - (20%)

  Fly    84 DDKSSDVITDDATNGRKKQKKNKKAKIRPLTMPVTSKDALMVLNEL-----KGVTVDNMQIK-RD 142
            |:||.|       ||:   :.:....|..:......|..:.:|.|.     |....|.::.: :.
Zfish     3 DEKSQD-------NGK---RNSGYTSIEQMLAVNPGKTPISLLQEYGTRIGKTPVYDLLKAEGQA 57

  Fly   143 HEGKIMARVVVNSKKYEAEGSSVNSARNAACEKALQEILTTKMKAVLDGPGKSLESDEDDILEKM 207
            |:.....||.|........|.|..:|::.|.|.|| ::|...|...:.|.|  :|.|
Zfish    58 HQPNFTFRVSVGDINCTGHGPSKKAAKHKAAEAAL-KMLKGGMLGGIGGNG--MEGD-------- 111

  Fly   208 ASYAIHKLGE----EWKTDDIDVATLYNDLKNKQTSVVEPKKPLPETWKNMHPCMVLNYMRPQCT 268
            ....|...||    |.|:.........|.:...|..||:....|||
Zfish   112 GFVGIEMEGECPQSEMKSSSSTQQAECNPVGALQELVVQKGWRLPE------------------- 157

  Fly   269 FIVSGGTGTNQNNTFSMSVCVDNCEFNAEGPSKKAARYKLSALVCNKLFGTDYP 322
            :.|:..:|......|:|:..|:.......|.|||.|:...:|.:.:::.  |.|
Zfish   158 YTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLSRIH--DVP 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
blanks	NP_647966.1	None
tarbp2	NP_956291.1	DSRM	31..>79	CDD:214634	9/47 (19%)
		DSRM	139..202	CDD:238007	18/81 (22%)
		Staufen_C	<278..325	CDD:293091

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170594003
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930