Protein Alignment blanks and stau1

DIOPT Version :9

• Sequence 1: NP_647966.1
• Gene: blanks / 38620
• FlyBaseID: FBgn0035608
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_991124.2
• Gene: stau1 / 334440
• ZFINID: ZDB-GENE-030131-6372
• Length: 702
• Species: Danio rerio
• Alignment Length: 258
• Identity: 57/258 - (22%)
• Similarity: 91/258 - (35%)
• Gaps: 73/258 - (28%)

  Fly    98 GRKKQ--KKNKKAKI------RPLTMPV---TSKDALMVLNELKGVTVDNMQIKRD--------- 142
            ||.:|  |.:..||.      .|:...:   |.:.|...||:.:...|..:.:||:
Zfish   243 GRTRQAAKHDAAAKAIKYLQKEPILQQITEMTDEPAQENLNKSEISQVFEIALKRNMPVDFEVLK 307

  Fly   143 -----HEGKIMARVVVNSKKYEAEGSSVNSARNAACEKALQEILTTKMKAVLDGPGKSLESDEDD 202
                 |....:.||||.....|.||.|...|:..|....|:|
Zfish   308 EAGAPHMKSFVVRVVVGEFAGEGEGKSKKIAKKQAAIAVLEE----------------------- 349

  Fly   203 ILEKMASYAIHKLGEEWKTDDIDVATLYNDLKNKQTSVVEPKKPLPETWKNMHPCMVLNYMR--- 264
                     :.:|.:...||.|.:.     :|.|..|::: .:..||..:.|:|...|..::
Zfish   350 ---------LRRLPQLPATDKIPLR-----IKKKSKSIIK-LQTSPEYGQGMNPISRLAQIQQAK 399

  Fly   265 ----PQCTFIVSGGTGTNQNNTFSMSVCVDNCEFNAEGPSKKAARYKLSALVCNKLFGTDYPQ 323
                |:.|.:...|....:.....:||...|.|  ..|||||.|: :.:|....:|.|...||
Zfish   400 KEKEPEYTLVTERGLPRRREFVMQVSVAGQNAE--GMGPSKKVAK-RNAAEKMLELLGFKVPQ 459

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
blanks	NP_647966.1	None
stau1	NP_991124.2	DSRM	75..138	CDD:214634
		DSRM	287..350	CDD:214634	16/94 (17%)
		DSRM	387..453	CDD:238007	16/68 (24%)
		Staufen_C	551..660	CDD:293091

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170593987
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930