DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment blanks and zfr

DIOPT Version :9

Sequence 1:	NP_647966.1	Gene:	blanks / 38620	FlyBaseID:	FBgn0035608	Length:	324	Species:	Drosophila melanogaster
Sequence 2:	NP_955852.2	Gene:	zfr / 321659	ZFINID:	ZDB-GENE-030131-378	Length:	1074	Species:	Danio rerio

Alignment Length:	148	Identity:	35/148 - (23%)
Similarity:	55/148 - (37%)	Gaps:	35/148 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    88 SDVITDDATNGRKKQKKNKKAKIRPLTMPVTSKDALMVLNELKGVTVDNMQIKRDHE-------- 144
            ||:|||.......|.|:..|.|..|      .||.|:......||....:.::.|.|
Zfish   754 SDIITDQDAGASAKGKEEDKEKKEP------PKDRLLKGVMRVGVLAKGLLLRGDKEVNLVLLCS 812

  Fly   145 ----GKIMARVV---------VNSKKYEAEGSSVNSA-RNAACEKALQEILTTKMKAVL------ 189
                ..::.|:|         |..:|||.:||...|| ...:|.....::..|....::
Zfish   813 EKPTKNLLTRIVEHLPKQLTMVTPEKYEVKGSIQESAIILTSCGDPKMQVTITLTSPIIREESSR 877

  Fly   190 DGP-GKSLESDEDDILEK 206
            ||. ..|:..|..|:|::
Zfish   878 DGDVTSSMVKDPADVLDR 895

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
blanks	NP_647966.1	None
zfr	NP_955852.2	ZnF_U1	324..353	CDD:197732
		C2H2 Zn finger	326..348	CDD:275371
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	344..374
		ZnF_U1	380..409	CDD:197732
		C2H2 Zn finger	380..402	CDD:275371
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	412..456
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	508..545
		ZnF_U1	575..606	CDD:197732
		C2H2 Zn finger	578..600	CDD:275371
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	697..718
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	761..781		5/25 (20%)
		DZF	784..1037	CDD:128842	22/112 (20%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1036..1074
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170594038
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930