DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment blanks and Strbp

DIOPT Version :9

Sequence 1:	NP_647966.1	Gene:	blanks / 38620	FlyBaseID:	FBgn0035608	Length:	324	Species:	Drosophila melanogaster
Sequence 2:	XP_011237345.1	Gene:	Strbp / 20744	MGIID:	104626	Length:	678	Species:	Mus musculus

Alignment Length:	277	Identity:	70/277 - (25%)
Similarity:	103/277 - (37%)	Gaps:	59/277 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    54 SDEKGTVSSEPKALSDQITSSMRVTKNKIADDKSSDVITDDATNGRKKQKKNKKAKIRPLTMPVT 118
            :|::|..||..|          |..::.:.|||..:          ||.|:|.: ||.. :..:.
Mouse   345 TDKEGAGSSALK----------RPFEDGLGDDKDPN----------KKMKRNLR-KILD-SKAID 387

  Fly   119 SKDALMVLNELKGVTVDNMQIK-RDHEGKIMARVV-----VNSKKYEAEGSSVNSARNAACEKAL 177
            ..:|||.||:::    ..:|.| ....|.:.|.|.     |:...|||.|.|..:|:.....|.|
Mouse   388 LMNALMRLNQIR----PGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVL 448

  Fly   178 QEILTTKMKAVLDGPGKSLESDEDDILEKMASYAIHKLGEEWKTDDIDVATLYNDLKNKQTSVVE 242
            |.:   ......|...:.:.|||             |...|.|.|.:.    .|...|...|..|
Mouse   449 QAM---GYPTGFDADIECISSDE-------------KSDNESKNDTVS----SNSSNNTGNSTTE 493

  Fly   243 PKKPLPE-------TWKNMHPCMVLNYMRPQCTFIVSGGTGTNQNNTFSMSVCVDNCEFNAEGPS 300
            ....|..       |....:|.|.||..|....:.:...||.:.:..|.|.|.||..:|...||:
Mouse   494 TSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPN 558

  Fly   301 KKAARYKLSALVCNKLF 317
            ||.|:...:.....|||
Mouse   559 KKVAKASAALAALEKLF 575

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
blanks	NP_647966.1	None
Strbp	XP_011237345.1	DZF	81..334	CDD:128842
		DSRM_STRBP_rpt1	384..467	CDD:380738	21/89 (24%)
		DSRM_STRBP_rpt2	512..575	CDD:380740	19/62 (31%)
		SGP	<608..664	CDD:375063
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167848517
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930