DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and D2005.1

DIOPT Version :10

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001379175.1 Gene:D2005.1 / 172543 WormBaseID:WBGene00008397 Length:323 Species:Caenorhabditis elegans


Alignment Length:240 Identity:46/240 - (19%)
Similarity:74/240 - (30%) Gaps:82/240 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LNELKGVTVDNMQIKRDHEGKIMARVVVNSKKYEAEGSSVNSARNAACEKALQEILTTKMKAVLD 190
            ::||..|..:....::..|||...:..:....|        |..:..|..|:.:..|.|:..|..
 Worm    69 IHELSTVDSECSIFEKKEEGKAALKPNLRLVLY--------SNYSPPCIHAVDDAATKKLSYVTP 125

  Fly   191 GPGKSLESDEDDIL-----EKMASYAIHKLGE---EWKTDDIDVATLYNDLKNKQTSVVEPKKPL 247
               .:|....||:|     ::..|..:|...:   :|.|..|..|.|.|.|              
 Worm   126 ---TNLTCVPDDVLTYEQIKETKSLRVHCTADKLFKWNTLGIQGALLSNVL-------------- 173

  Fly   248 PETWKNMHPCMVLNYM--------RPQCTFIVSGGTGTNQNN----TFSMSV------------- 287
                   ||..:.|..        ....::.:.|..|.|:|.    ..||.|             
 Worm   174 -------HPIFIDNIFFGSEAPVSDESLSYALQGRLGPNENEREIIVESMPVQMRMHMGISHLWH 231

  Fly   288 ----CVDNCEFNAEGPSKKAARYKLSALVC--------NKLFGTD 320
                .|:..::|....||.:     .:.||        .||.|.|
 Worm   232 RGVDSVETLDYNTGRTSKGS-----PSRVCKAEIFEAYRKLNGVD 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 DSRM_SF 120..180 CDD:444671 10/53 (19%)
DSRM_SF 254..314 CDD:444671 16/96 (17%)
D2005.1NP_001379175.1 A_deamin 1..317 CDD:470647 46/240 (19%)

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