DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and Zfr2

DIOPT Version :9

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001030067.2 Gene:Zfr2 / 103406 MGIID:2143792 Length:874 Species:Mus musculus


Alignment Length:186 Identity:36/186 - (19%)
Similarity:66/186 - (35%) Gaps:38/186 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PSAEE-----DAVAVIPLADNLKKTAMGGENKSDEKGTVSSEPKALSDQITSSMRVTKNKIADDK 86
            |:.||     .||:....|..|....:..|  |.:.||::|.|..:...:.....:.|..:....
Mouse   542 PTEEELQAIQTAVSHTERALRLVSDTLAEE--SSQHGTLASPPPRMLKGVVRVGILAKGLVLRGD 604

  Fly    87 SSDVITDDATNGRKKQKKNKKAKIRPLTMPVTSKDALMVLNELKGVTVDNMQIKRDHEGKIMARV 151
            .|..:|...:   ||...:...:|:. .:|          .||..|..|..::..||:..|:...
Mouse   605 HSVQLTLLCS---KKPTHSLLQRIKQ-ELP----------RELSIVAEDKYEVSSDHDANIVISA 655

  Fly   152 VVN-SKKYEAEGSSVNSARNAACEKALQEILTTKMKAVLDGPGKSLESDEDDILEK 206
            .|. ..|.....:|.....:.:.::..|:.|                ||.:|:|::
Mouse   656 CVEPGVKVTVSATSPLMREDPSVKQGQQDAL----------------SDPEDVLDR 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 None
Zfr2NP_001030067.2 CytochromB561_N <72..>169 CDD:286826
ZnF_U1 205..232 CDD:197732
C2H2 Zn finger 207..253 CDD:275371
ZnF_U1 252..283 CDD:197732
C2H2 Zn finger 254..276 CDD:275371
ZnF_U1 399..430 CDD:197732
C2H2 Zn finger 402..424 CDD:275371
DZF 586..837 CDD:295427 23/140 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848521
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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