DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and CG42397

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster


Alignment Length:180 Identity:52/180 - (28%)
Similarity:69/180 - (38%) Gaps:39/180 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 TTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQWTL 514
            |::...|.|..||.|.||...||..:.|||.|..||..::|   |....||.:||.|| .|:..|
  Fly    21 TSSGEDTNIKLTTDESTTVEDTTEVLVTTLPPPVLCADEDL---FLPAPDCREYYQCL-YGEGIL 81

  Fly   515 APCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVA 579
            ..|..|.|:|.....|..|  ...|...:..|||                               
  Fly    82 KICPDGLYWDRELNVCAWD--SQHCADDKNETTT------------------------------- 113

  Fly   580 PKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKC 629
            |.|..|.  :....:.|..:|||:|.||..|.....||.|.:::..|:.|
  Fly   114 PSTLNCA--SGLPFLPYIPDCTKFIQCVYNIGFKLSCPSGLYWNQPLQSC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342
CBM_14 485..539 CDD:426342 17/53 (32%)
CBM_14 585..638 CDD:426342 14/45 (31%)
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 16/49 (33%)
ChtBD2 125..163 CDD:214696 13/37 (35%)
Blue background indicates that the domain is not in the aligned region.

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