DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4835 and CG6933

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_730495.1 Gene:CG6933 / 40214 FlyBaseID:FBgn0036952 Length:363 Species:Drosophila melanogaster


Alignment Length:379 Identity:73/379 - (19%)
Similarity:119/379 - (31%) Gaps:118/379 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 FAYIG---NCSEYLICKDNQ-VQMGHCPPNTLFNPDLLVCDEPDDVVCLGDRTTT------PIPT 456
            :.|||   ||..:..||:.: |..|.||...:||.....||..:..||......|      |:..
  Fly    48 YGYIGNPSNCHAWGYCKNQEVVAWGTCPNGLVFNAQAGSCDYANTTVCSTSAVETCSNVKSPMYV 112

  Fly   457 TIPTTTTE---------------KTTPTTTTTTVATTLGP----DQLCDGQELGASFSYPDDCSK 502
            ..|...||               .|....:.::.....||    |.:|...........|:.|..
  Fly   113 ANPLNCTEYAYCDGTGQISYGDCGTGGVYSASSTKCIWGPACPQDTICRFMLSNIFVGDPNQCGN 177

  Fly   503 YYLCLGGGQWTLAPCIYGS----------YFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTT 557
            |..|:.|         ||:          |::.:||.|            |.|...|...:.:..
  Fly   178 YINCVNG---------YGTSEKCSSTANPYYNKATGNC------------QSTNPCTGEDSNSGN 221

  Fly   558 TERNTTPKSTATTTERTTTTVAPKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFF--CPDGT 620
            :::.|..::.||..:......|....:.|...:...::....|..|..|.:.....::  ||.||
  Fly   222 SDQFTVGQTNATACDEEAFKAADPLTVNGESVDYRYVSDGVTCYGYYYCAAVNATGYWNQCPTGT 286

  Fly   621 FFSSKLEKCIDDWDESDCEGDQSTTTLEPGYTRPPPEPTMCTNSS----RDTFPYPDNCQWFIRC 681
            .|::  .||:.                        |...:||::.    .:.|...:.|:.:   
  Fly   287 QFNA--GKCVS------------------------PASFVCTHNRCGNVNNPFMADEGCKNY--- 322

  Fly   682 VDDYIYMMDVCNCG---------EYYDPITEKCGADVPSDACRWDYTSTTSTTS 726
                    .:|:.|         .|||.:...|...:|      ||....||.|
  Fly   323 --------TICSSGITGSCPTNAPYYDEVNNICTTKIP------DYAICNSTAS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 15/45 (33%)
CBM_14 485..539 CDD:426342 12/63 (19%)
CBM_14 585..638 CDD:426342 11/54 (20%)
CBM_14 661..714 CDD:426342 11/65 (17%)
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
CG6933NP_730495.1 ChtBD2 44..90 CDD:214696 15/41 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.