DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and obst-F

DIOPT Version :9

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster


Alignment Length:396 Identity:79/396 - (19%)
Similarity:116/396 - (29%) Gaps:141/396 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SWDPPPA--PPGISDDYCRNKEDGSVHYYPYDCQAYINCTYGWPVLNYCIEDKVFNKYLGICDTP 232
            ||:.|..  ..|.....|..:::|.:..:|.||..|.:|: ..|.|.||.:...|::...|||.|
  Fly    26 SWELPKVRHTVGHLSHICLGRQEGDLVPHPLDCNGYFSCS-RVPTLLYCDQGLQFDENRAICDLP 89

  Fly   233 DMADCEELPLPTTTTEMPPTSTTEEDVVCGPTPEGIEEDYCVPKGNGFYEYPYNCSGYLACKNGC 297
            :..:|.  |:.|.|.|                                            ..||.
  Fly    90 ENTNCR--PVATGTVE--------------------------------------------SANGL 108

  Fly   298 TDLDYCQPDKLFNNWLHICDTPDSVRCDPLP-FPTTPGTTNKPTTPSVTTTPSITTTPSTPTTLP 361
            .|      :...|.|.|          .|.| |.....|:.:|..|.                  
  Fly   109 AD------NSELNWWPH----------KPKPVFVAVDVTSGQPVNPM------------------ 139

  Fly   362 SDGSTTEIHSSTTEEIVTTTDGLPSDVDPNDCKDEKDGTIF-AYIGNCSEYLICKDNQVQMGHCP 425
                                    ...||...:....|..| .:..||..|.||....:....|.
  Fly   140 ------------------------EKYDPEHIECRHYGAYFLPHPRNCGLYFICAYGHLHRHQCG 180

  Fly   426 PNTLFNPDLLVCDEPDDVVCLGDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQEL 490
            ..|.:|.:...|...|..:|.|:...:...|.:.||....|..:....||...:|..:....|:.
  Fly   181 RGTAWNFEKSECQLSDQAICYGESQISEPHTDVETTMKVPTANSEGAVTVCYIVGSSEYTTLQQF 245

  Fly   491 GAS-------------------------------FSYPDDCSKYYLCLGGGQWTLAPCIYGSYFD 524
            ..|                               .|:|:||||||:|: ||...|..|..|.::|
  Fly   246 LTSPEITELPPVTPPSPPRAEANALTCPSTKQSYMSHPEDCSKYYICI-GGMPVLTSCPKGLFWD 309

  Fly   525 PSTGQC 530
            ..:|.|
  Fly   310 QKSGFC 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:279884
CBM_14 185..237 CDD:279884 16/51 (31%)
CBM_14 273..322 CDD:279884 6/48 (13%)
CBM_14 393..444 CDD:279884 12/51 (24%)
CBM_14 485..539 CDD:279884 19/77 (25%)
CBM_14 585..638 CDD:279884
CBM_14 661..714 CDD:279884
CBM_14 744..796 CDD:279884
CBM_14 914..962 CDD:279884
CBM_14 1175..1212 CDD:279884
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 16/51 (31%)
CBM_14 156..198 CDD:279884 11/41 (27%)
CBM_14 272..321 CDD:279884 17/45 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472925
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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