DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and obst-J

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster


Alignment Length:336 Identity:67/336 - (19%)
Similarity:108/336 - (32%) Gaps:115/336 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 DPNDCKDEKDGTIFAYIGNCSEYLIC---KDNQVQMGHCPPNTLFNPDLLVCDEPDDVVCLGDRT 450
            ||......||        :|..:.:|   .|...|..:||....|:..|::|             
  Fly    34 DPWQMLPHKD--------HCQRFYVCTGDDDMPFQEFNCPAEYHFSKKLMIC------------- 77

  Fly   451 TTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQWTLA 515
                   :|...|:::.....|.:|...                  ..||::|..||.||.:.:|
  Fly    78 -------VPGACTDESVFCGLTNSVERV------------------QSDCTRYRQCLEGGSFAVA 117

  Fly   516 PCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVAP 580
            .|..|:||||:...|.|                                  .|.:.....:.|.|
  Fly   118 KCSVGNYFDPARRACLP----------------------------------VAISAAHQCSCVLP 148

  Fly   581 KTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDESDCEGDQSTT 645
                     :|..:|.|::|..|..|.|.......||.|.:|..::..|:.         |.:..
  Fly   149 ---------DNATLANPSDCETYFRCHSGQAELVQCPSGDYFDERVSSCVP---------DHTGI 195

  Fly   646 TLEPGYTRPPPEPTM---------CTNSSRDTFPYPDNCQWFIRCVDDYIYMMDVCNCGEYYDPI 701
            .||    :|...||:         |..:.....|:..:||.:..|....:..|. |..|:|:|.:
  Fly   196 CLE----KPTMPPTLTEQALAMDECIRTGSRLAPHSRDCQRYYICAKKRVLEMR-CPRGQYFDVV 255

  Fly   702 TEKCGADVPSD 712
            ...|..|:.|:
  Fly   256 RRYCALDLGSE 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 11/53 (21%)
CBM_14 485..539 CDD:426342 16/53 (30%)
CBM_14 585..638 CDD:426342 12/52 (23%)
CBM_14 661..714 CDD:426342 13/52 (25%)
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 11/66 (17%)
CBM_14 145..192 CDD:426342 14/64 (22%)
CBM_14 216..259 CDD:426342 10/43 (23%)
Blue background indicates that the domain is not in the aligned region.

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