DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and obst-H

DIOPT Version :9

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster


Alignment Length:241 Identity:62/241 - (25%)
Similarity:89/241 - (36%) Gaps:38/241 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 CDGQELGASFSYPDDCSKYYLCLGGGQWTLAPCIYGSYFDPSTGQCGPDVAPD-AC------KPS 542
            |||.:.||.....:.|..|..| .|.:.....|..|.|||...|.|  |:|.: :|      :||
  Fly    26 CDGMDDGAFVQSWESCQSYVYC-EGEESLKGDCEDGEYFDSEAGTC--DIAANVSCFLDEVDEPS 87

  Fly   543 QVTTTTTTTTTETTTTERNTTPKSTATTTE----RTTTTVAPKTGICGGRNENENIAYPNNCTKY 603
            .....|.....|...|.|.|.|....|.||    .....|.|...|.....:...:|..|:||.|
  Fly    88 DPEPETDEEEEEIPATPRPTEPPIVETPTEVDIINIAPVVRPNCPISDDPGQVIFMASNNSCTNY 152

  Fly   604 IVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDESDCEGDQSTTTLEPGYTRPPPEPTMCTNSSRDT 668
            .:|.....:...|.:..:|:|...:| |..|:..|..:.             |....|.....:.
  Fly   153 YLCYHGHAMEMHCDNELYFNSLTGQC-DYPDKVQCAFED-------------PRSHKCLPHMTEF 203

  Fly   669 FPYPDNCQWFIRCVDDYIYMMDVCNCGEYYDPITEKCGADVPSDAC 714
            ||:||||.:|..|:..::.:.   .|..||       |.|:...:|
  Fly   204 FPHPDNCNYFYYCIKGFLTLQ---QCPFYY-------GWDIERRSC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:279884
CBM_14 185..237 CDD:279884
CBM_14 273..322 CDD:279884
CBM_14 393..444 CDD:279884
CBM_14 485..539 CDD:279884 18/54 (33%)
CBM_14 585..638 CDD:279884 12/52 (23%)
CBM_14 661..714 CDD:279884 14/52 (27%)
CBM_14 744..796 CDD:279884
CBM_14 914..962 CDD:279884
CBM_14 1175..1212 CDD:279884
obst-HNP_001034020.1 CBM_14 26..77 CDD:279884 18/53 (34%)
CBM_14 142..184 CDD:279884 12/42 (29%)
ChtBD2 203..240 CDD:214696 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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