DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4835 and CG7248

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_648530.1 Gene:CG7248 / 39356 FlyBaseID:FBgn0036229 Length:796 Species:Drosophila melanogaster


Alignment Length:866 Identity:302/866 - (34%)
Similarity:397/866 - (45%) Gaps:216/866 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 YCRNKEDGSVHYYPYDCQAYINCTYGWPVLNYCIEDKVFNKYLGICDTPDMADCEELPLPT-TTT 247
            ||.:..:| .:.|||:|.|||.|......|.||.:.|:||..|.|||||...|||.||.|| :.|
  Fly    61 YCESLSNG-FYEYPYNCSAYITCYDSCADLEYCPDGKLFNSPLQICDTPGAVDCEPLPYPTPSPT 124

  Fly   248 EMPPTSTTEEDVVCGPTPEGIEEDYCV-PKGNGFYEYPYNCSGYLACKNGCTDLDYCQPDKLFNN 311
            |.||                  |:.|: .:.|.......||:.:..|.|..:.:..|..:.|||.
  Fly   125 ESPP------------------ENPCLGTRNNTLLPSAENCNEFYLCVNDQSKVYRCPGEMLFNP 171

  Fly   312 WLHICDTPDSVRC-------DPLPFPTTP-------------GT---------------TNKPTT 341
            .|:|||..|:|.|       |||. .|||             ||               .||..|
  Fly   172 DLNICDDKDNVWCYGDRTTPDPLD-TTTPAEESFTKCEDQEKGTFFPDPENCQQYYYCWGNKSYT 235

  Fly   342 ------------------PSVTTTPSITTTPSTPTTLPSDGSTTEIHSSTTEEIVTTTDGLPSDV 388
                              |.:.......|||::..|:.:..|||...:||.:.:           
  Fly   236 ILPCPVDNWFNPISGNCGPDIAPDACRETTPTSTPTIDTSSSTTVAPTSTEDSV----------- 289

  Fly   389 DPNDCKDEKDGTIFAYIGNCSEYLICKDN-QVQMGHCPPNTLFNPDLLVCDEPDDVVCLGDRTTT 452
             .|.|.|::.|..|....:|..||:|.:| :.....||.|..|:|....|.              
  Fly   290 -GNPCADQELGASFPIKSDCQSYLLCLNNGESTTAKCPSNAWFDPKTGDCG-------------- 339

  Fly   453 PIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQWTLAPC 517
              |...||...|.   ..||||..||..|...|..||||.|:....:|.:|.||:|.|:.|:|.|
  Fly   340 --PNVSPTACLES---FETTTTAVTTQAPKDPCADQELGTSYPLVTNCQQYILCMGNGESTVANC 399

  Fly   518 IYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATT-----TERTTTT 577
            ||.|:|||.||.|||||:|.|||.|.|||.:.|||::.|:.  .|||..|.:|     ||.|||.
  Fly   400 IYNSWFDPQTGNCGPDVSPTACKESGVTTASPTTTSQATSP--LTTPSPTWSTLPTANTEETTTN 462

  Fly   578 VAPKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDESDCEGDQ 642
            .....|||.|.::.....||..|.|||:|.||:||||:||:..||:..|::|: :|:.|||...:
  Fly   463 PPDIVGICSGESDGYYATYPEVCNKYILCASPVPIAFYCPESLFFNEALQRCV-EWESSDCSNGE 526

  Fly   643 STTTLEPGYTRPPPEPTMCTNSSRDTFPYPDNCQWFIRCVDDYIYMMDVCNCGEYYDPITEKCGA 707
             |||..||:|.|.|:..:|:||:....||.:||||:|.|.|:..|||.:|...||:||.|.|||.
  Fly   527 -TTTSSPGFTTPSPDTQICSNSTGLNLPYQENCQWYIYCTDENSYMMGICGSEEYFDPWTGKCGF 590

  Fly   708 DVPSDACRWDYTST---TSTTSEPTTTTAVTRPPPQKGPCDDVEDGALVAYPNDCSKYIQCDRPI 769
            .|..:|||...|::   |.:|..|||....:.|..:..|||...:|.||.||:||||:|||.:|.
  Fly   591 GVSPEACREIQTTSPTVTDSTEGPTTVITPSTPGSEPDPCDGAPEGKLVPYPDDCSKFIQCIQPD 655

  Fly   770 AVAFECEKGDEFSVELGKCVDASLANCSITTTAKPSESTTTPRDGEGSTTPSEPSTGSSTESSTE 834
            .:.::|.:|.|||..|.:|:....|||||..|..|                              
  Fly   656 PIVYDCREGQEFSAALERCMAPWFANCSIPATTIP------------------------------ 690

  Fly   835 STTEPSTESTTESTTESTTESTTESSTGQSTETTESSTVLSTDTSESPSTISTPPSSTTMEPGTT 899
                                                           |.||   |::||      
  Fly   691 -----------------------------------------------PVTI---PTTTT------ 699

  Fly   900 NPEASTTEKPA-DGICEGKTDDSLVPYPRNCSKYIKCQYPIPVGYDCPDGLEFSPTELTCMDPEL 963
                 |||||: :|||..|.:.||||||.||||||.|:.||||||.||:|.||:|..|||.||.|
  Fly   700 -----TTEKPSPNGICADKAEGSLVPYPGNCSKYIACEDPIPVGYACPEGEEFNPIILTCTDPHL 759

  Fly   964 AGCSTKLTTPGLTTLSTEASS 984
            |||:     |....:|.:..|
  Fly   760 AGCN-----PSALHISPKTES 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342 22/51 (43%)
CBM_14 273..322 CDD:426342 15/49 (31%)
CBM_14 393..444 CDD:426342 15/51 (29%)
CBM_14 485..539 CDD:426342 29/53 (55%)
CBM_14 585..638 CDD:426342 23/52 (44%)
CBM_14 661..714 CDD:426342 25/52 (48%)
CBM_14 744..796 CDD:426342 23/51 (45%)
CBM_14 914..962 CDD:426342 31/47 (66%)
CBM_14 1175..1212 CDD:426342
CG7248NP_648530.1 CBM_14 62..113 CDD:426342 22/51 (43%)
CBM_14 136..182 CDD:426342 14/45 (31%)
CBM_14 207..261 CDD:426342 6/53 (11%)
CBM_14 293..347 CDD:426342 18/69 (26%)
CBM_14 367..421 CDD:426342 29/53 (55%)
CBM_14 470..522 CDD:426342 23/52 (44%)
CBM_14 544..597 CDD:426342 25/52 (48%)
CBM_14 630..678 CDD:426342 22/47 (47%)
CBM_14 710..758 CDD:426342 31/47 (66%)
Blue background indicates that the domain is not in the aligned region.

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