DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and obst-G

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:259 Identity:69/259 - (26%)
Similarity:105/259 - (40%) Gaps:49/259 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 KDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLFNPDLLVCDEPDDVVCLGDRTTTPIPTTIPTT 461
            |:|.:....|:|..|.:|.|.....|.|..||||||..|.||:||:|.|:.|.....:..|..:.
  Fly    35 KNGGLLPMFGSCKGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSE 99

  Fly   462 TTE-------KTTPTTTTTTV----ATTLGPDQLCDGQELGASFSYPDDCSKYYLCLGGGQWTLA 515
            :.|       ||.|..|....    .|||  |::|.|::.|...:....|.:||:| ...:..|.
  Fly   100 SDEDDDEEMAKTDPPVTVKATKKPRPTTL--DKMCAGKKDGVMLTKNGSCQEYYVC-KAKKPHLR 161

  Fly   516 PCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVAP 580
            .|....:|.|:...|        .|.|:...        :..|..|......|||          
  Fly   162 SCPDKQHFSPTRRIC--------MKASEAKC--------SGGTRENKESDGPATT---------- 200

  Fly   581 KTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFS--------SKLEKCIDDWDES 636
             .|:|....||..:|:.::|.|:::|.:.:.:...||.|..|:        .|:.||....:||
  Fly   201 -GGVCSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCPTGLHFNIATSRCDYPKIAKCQTKLNES 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 20/46 (43%)
CBM_14 485..539 CDD:426342 12/53 (23%)
CBM_14 585..638 CDD:426342 16/60 (27%)
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 21/47 (45%)
CBM_14 132..184 CDD:426342 14/60 (23%)
CBM_14 204..256 CDD:426342 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.

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