DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4835 and CG17826

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster


Alignment Length:984 Identity:200/984 - (20%)
Similarity:300/984 - (30%) Gaps:352/984 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 DNCSLFLVCDCLYPTV-KLCPANLWWDNKTQQCNYPQAVECIYYSIETPEPTDGTTRFTPEPTSS 127
            |:|:.:|:| |....| |.|.:..:|:::...|    .|:            ||..|   .||..
  Fly    39 DDCTKYLIC-CHGEFVSKSCASGSYWNSELNIC----VVD------------DGQCR---PPTCV 83

  Fly   128 TQKITPEP-----------------TEPP----SSTAKITTEST----TGTSTEITSSTPSSYLP 167
            ..:|||.|                 |.|.    :||.....|.|    .|..|..|         
  Fly    84 DGEITPNPDDCAGYLECVDGIIVILTCPDGDYFNSTLNRCVEDTCGVCNGNGTTCT--------- 139

  Fly   168 TSSWDPPPAPPGISDDYCRNKEDGSVHYYPYDCQAYINCTYGWPVLNYCIEDKVFNKYL------ 226
                                  ||.:...|.:|..|:.|:.|..|...|.:...||..|      
  Fly   140 ----------------------DGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNAILETCVQD 182

  Fly   227 --GIC------DTPDMADCEELPLPTTTTEMPPTSTT-----EEDVVCGPTPEGIEEDYCVPKGN 278
              |||      .|..:|||....:.:....:..:..:     .:..||     .::...|  .||
  Fly   183 DEGICVNCKEGSTKPLADCTMYEICSGGKYVTKSCDSGYYWNSQSEVC-----DVDNGQC--NGN 240

  Fly   279 G-------FYEYPYNCSGYLACKNGCTDLDYCQPDKLFNNWLHICDTPDS---VRCDPLPFPTTP 333
            |       ....|.||:|||||.||......|.....||..|..|...|.   |.|         
  Fly   241 GTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNVTLETCVQDDEGICVNC--------- 296

  Fly   334 GTTNKPTTPSVTTTPSITTTPSTPTTLPSDGSTTEIHSSTTEEIVT----TTDGLPS-------- 386
                                        .:|||..:...|..||.:    .|....|        
  Fly   297 ----------------------------KEGSTKPLADCTMYEICSGGKYVTKSCDSGYYWNSQS 333

  Fly   387 ---DVDPNDCKDE----KDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLFNPDLLVCDEPDDVV 444
               |||...|...    .||.:.....||:.||.|.:.......|.....||..|..|.:.|:.:
  Fly   334 EVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNATLETCVQDDEGI 398

  Fly   445 CLG--DRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSKYYLCL 507
            |:.  :.:|.|:.                                           ||:.|.:| 
  Fly   399 CVNCKEGSTKPLA-------------------------------------------DCTMYEIC- 419

  Fly   508 GGGQWTLAPCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTE 572
            .||::....|..|.|::..:..|  ||....|..:..|.|                         
  Fly   420 SGGKYVTKSCDSGYYWNSQSEVC--DVDNGQCNGNGTTCT------------------------- 457

  Fly   573 RTTTTVAPKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDESD 637
                             :.|....|.||..|:.|.:...::..|.||.:|::.||.|:.| ||..
  Fly   458 -----------------DGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNATLETCVQD-DEGI 504

  Fly   638 CEGDQSTTTLEPGYTRPPPEPTM---CTNSSRDTFPYPDNCQWFIRCVDDYIYMMDVCNCGEYYD 699
            |      ...:.|.|:|..:.||   |:...                     |:...|:.|.|::
  Fly   505 C------VNCKEGSTKPLADCTMYEICSGGK---------------------YVTKSCDSGYYWN 542

  Fly   700 PITEKCGADVPSDACRWDYTSTTSTTSEPTTTTAVTRPPPQKGPCDDVEDGALVAYPNDCSKYIQ 764
            ..:|.|  ||.:..|..:  .||.|.:|                        :...|.||:.|:|
  Fly   543 SQSEVC--DVDNGQCNGN--GTTCTENE------------------------VKVNPADCAGYLQ 579

  Fly   765 CDRPIAVAFECEKGDEFSVELGKCVDASLANCSITTTAKPSESTTTPRDGEGSTTPSEPSTGSST 829
            |...:.||.:|.....|:..|.:| :....|..|..|..| :....|.:   |..|.|.:..:..
  Fly   580 CINGVFVARKCSATQFFNTTLKEC-EVDTENVCIPKTCDP-DCCDVPNN---SIWPVEKNCSAFY 639

  Fly   830 ESSTESTTEPSTESTTESTTESTTESTTESSTGQSTETTESSTVLSTDTSESPSTISTPPSSTTM 894
            :....:..|           :..:.:...:|..:..:..|:  |...|.|..||.....||.|..
  Fly   640 QCVNGNKYE-----------QRCSNNLQYNSIIEQCDYPEN--VQCDDGSAPPSGPIAGPSGTYC 691

  Fly   895 EPGTTNPEASTTEKPADGICEGKTDDSL-VPYPRNC-SKYIKCQYPIPVGYDCPDGLEFSPTELT 957
            |              :.|.|.|:.|.:: .....:| |.|:.||....|.:.|..||.|:....:
  Fly   692 E--------------SHGRCVGQRDGTMFADASGDCSSNYVVCQCECEVNFTCSSGLLFNLQVKS 742

  Fly   958 CMDPELAGC 966
            |..|:...|
  Fly   743 CDWPDNVKC 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342 11/39 (28%)
CBM_14 185..237 CDD:426342 17/65 (26%)
CBM_14 273..322 CDD:426342 20/58 (34%)
CBM_14 393..444 CDD:426342 14/54 (26%)
CBM_14 485..539 CDD:426342 12/53 (23%)
CBM_14 585..638 CDD:426342 16/52 (31%)
CBM_14 661..714 CDD:426342 9/52 (17%)
CBM_14 744..796 CDD:426342 12/51 (24%)
CBM_14 914..962 CDD:426342 14/49 (29%)
CBM_14 1175..1212 CDD:426342
CG17826NP_648528.1 CBM_14 36..74 CDD:426342 11/51 (22%)
ChtBD2 <89..124 CDD:214696 6/34 (18%)
CBM_14 145..184 CDD:426342 10/38 (26%)
CBM_14 251..290 CDD:426342 15/38 (39%)
CBM_14 357..396 CDD:426342 10/38 (26%)
CBM_14 463..502 CDD:426342 13/39 (33%)
CBM_14 563..610 CDD:426342 14/71 (20%)
CBM_14 621..670 CDD:426342 7/64 (11%)
CBM_14 697..749 CDD:426342 15/51 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.