DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4835 and CG7252

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_648527.1 Gene:CG7252 / 39353 FlyBaseID:FBgn0036226 Length:474 Species:Drosophila melanogaster


Alignment Length:491 Identity:116/491 - (23%)
Similarity:166/491 - (33%) Gaps:127/491 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 NDCKDEKDGTIFAYIGNCSEYLICKDNQVQ-MGHCPPNTLFNPDLLVCDEPDDVVCLG------- 447
            |.|::::|||......:||.:::|...:|. :|.||....||.:|..||......|||       
  Fly    28 NVCQNQEDGTRLPLATHCSRFVVCLKGEVSIIGSCPRGLHFNRELRECDFQWRANCLGLSAFAEV 92

  Fly   448 --------------------DRTTT-------PIPTTIPTTTTEKTTPTTTTT--------TVAT 477
                                |.|||       |..||..|..::.|.||..||        :..|
  Fly    93 DDQCTCDCCAEECQDPIDDIDETTTAVTEDCDPDTTTSATEPSDSTEPTDATTDFDDPNNSSNTT 157

  Fly   478 TLGPDQL----------CDGQELGASFSYPDDCSKYYLCLGGGQWTLAPCIYGSYFDPSTGQC-- 530
            ...|..:          |..|:.|.....|..|.::..|..|..... .|..|.||:.:...|  
  Fly   158 PSSPSVVPSYCKSSRTDCVNQKTGTYIDMPGICVRFIQCNNGCAEEF-QCPSGLYFNTAIDDCDY 221

  Fly   531 --GPDVAPDACKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVAPKTGICGGRNENEN 593
              ..|..|.|                           ..:|..|..:.|.....|.|.|:.:...
  Fly   222 WWNVDCTPTA---------------------------DGSTEIEGPSGTTCSSQGECAGKRDGYM 259

  Fly   594 IAYPNNCTKYIVCVSPIPIAFFCPDGTFFSSKLEKCIDDWDES----------DCEGD-QSTTTL 647
            ||.||: ..:.||....|||..|.:|..|:...:.|  ||.:.          .|.|| ....||
  Fly   260 IADPNS-NGFFVCQCQCPIAMPCSEGLKFNETAQVC--DWIKDTKSAIGSSAVQCYGDLVYNATL 321

  Fly   648 E----PGYTRPPPE----PTMCTNSSR-DTFPYPDNCQWFIRC-----VDDYIYMMDVCNCGEYY 698
            :    |....|..|    .|:|.|... :.||....|..|.:|     |:.|      |.....|
  Fly   322 DQCDYPENYVPKVECNTTSTVCQNQPEGELFPVEGKCNMFYKCNFNCAVEQY------CPNNLVY 380

  Fly   699 DPITEKCGADVPSD-ACRWDYTSTTSTTSEPTTTTAVTRPPPQKGPCDDVEDGALVAYPNDCSKY 762
            :|.||:|  :.|.| .|.|:||..:...:.|:....     ...|.|....:|..:....:||.|
  Fly   381 NPNTEEC--EYPQDYVCPWEYTPPSGPNAGPSGIAC-----ESNGRCMGQREGTYLKSTTNCSNY 438

  Fly   763 IQCDRPIAVAFECEKGDEFSVELGKCVDASLANCSI 798
            :.|.....|..||..|..:...|..|...:...|::
  Fly   439 VVCQCECEVEMECADGLYWDESLQTCNYKNQVTCTL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 16/51 (31%)
CBM_14 485..539 CDD:426342 14/57 (25%)
CBM_14 585..638 CDD:426342 17/62 (27%)
CBM_14 661..714 CDD:426342 17/59 (29%)
CBM_14 744..796 CDD:426342 12/51 (24%)
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
CG7252NP_648527.1 CBM_14 30..79 CDD:426342 16/48 (33%)
CBM_14 175..226 CDD:426342 12/51 (24%)
CBM_14 251..296 CDD:426342 15/47 (32%)
CBM_14 343..394 CDD:426342 17/58 (29%)
CBM_14 420..471 CDD:426342 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.