DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and CG5883

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_648526.2 Gene:CG5883 / 39352 FlyBaseID:FBgn0036225 Length:339 Species:Drosophila melanogaster


Alignment Length:467 Identity:91/467 - (19%)
Similarity:131/467 - (28%) Gaps:191/467 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 IHSSTTEEIVTTTDGLPSDVDPNDCKDEKDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLFNPD 433
            :|.|.....:..||.:        |:..||||.....|:|||.:||::.:...|           
  Fly    19 VHQSIQTRYLNATDDI--------CRLFKDGTQLLKPGSCSESIICQNFESTPG----------- 64

  Fly   434 LLVCDEPDDVVCLGDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPD 498
                     :.|.|.:         |..:..|.:...:..|...|   .::|.|...|    |..
  Fly    65 ---------ITCSGSK---------PYYSKSKGSCQASADTYCDT---SKICKGSGTG----YIG 104

  Fly   499 D---CSKYYLC-----LGGGQWTLAPCIYGSYFDPSTGQCGPDVAPDACKPSQVTTTTTTTTTET 555
            |   |:.:|.|     ||.|     .|..|.|||..:..|                         
  Fly   105 DTINCANWYYCDADALLGKG-----TCNLGMYFDQVSKSC------------------------- 139

  Fly   556 TTTERNTTPKSTATTTERTTTTVAPKTGICGGRNENENIAYPNNCTKYIVCVSPIPIAFFCPDGT 620
                           .....|..|.|..||.............||.||..|.|...:...|.:|.
  Fly   140 ---------------VYSEDTVCAAKYEICDVAPVGTPFRDDANCHKYYTCSSKSLVENTCENGL 189

  Fly   621 FFSSKLEKCIDDWDESDCEGDQSTTTLEPGYTRPPPEPTMCTNSSRDTFPYPDNCQWFIRCVDDY 685
            :::.....|:...|                        .:|.|     .|.||..     |.:..
  Fly   190 YYNVATGTCVRKKD------------------------VICEN-----HPLPDEV-----CGNKK 220

  Fly   686 I-----YMMDVCNCGEYY------------DPITEKCG----------ADVPSDACRWDYTSTTS 723
            :     ::.|:..|..||            |||.::|.          |.:|.::.:.||..   
  Fly   221 LAVRNKFVSDMATCRGYYYCRDLGSGIPDTDPIYQQCDENNFFNQERQACMPRESQKCDYDR--- 282

  Fly   724 TTSEPTTTTAVTRPPPQKGPCDDVEDGALVAYPNDCSKYIQC-DRPIAVAFECEKGDEFSVELGK 787
                                ||..:||..||..:.|..||:| |........||         .|
  Fly   283 --------------------CDGRKDGFEVAEIDGCHHYIECVDGRETTPISCE---------DK 318

  Fly   788 CVDASLANCSIT 799
            ..|....|||.|
  Fly   319 YFDVVTQNCSST 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 12/50 (24%)
CBM_14 485..539 CDD:426342 17/61 (28%)
CBM_14 585..638 CDD:426342 11/52 (21%)
CBM_14 661..714 CDD:426342 16/79 (20%)
CBM_14 744..796 CDD:426342 15/52 (29%)
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
CG5883NP_648526.2 CBM_14 95..146 CDD:426342 17/99 (17%)
CBM_14 154..204 CDD:426342 11/73 (15%)
Blue background indicates that the domain is not in the aligned region.

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