DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and obst-A

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_608378.2 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster


Alignment Length:265 Identity:64/265 - (24%)
Similarity:85/265 - (32%) Gaps:88/265 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 CSLFLVCDCLYPTVKLCPANLWWD---NKTQQCNYPQAVECIYYSIETPEPTDGTTRFTPEPTSS 127
            |..|.|||......||||..|.:|   .|..:|:.|..|:|          .|.|          
  Fly    38 CDKFYVCDDGVAKAKLCPDGLVFDPLNRKFNKCDQPFNVDC----------EDRT---------- 82

  Fly   128 TQKITPEPTEPPSSTAKITTESTTGTSTEITSSTPSSYLPTSSWDPPPAPPGISDDYCRNKEDGS 192
                  |..||.||                                         .||..|....
  Fly    83 ------ELQEPKSS-----------------------------------------KYCPRKNGFF 100

  Fly   193 VHYYPYDCQAYINCTYGWPVLNYCIEDKVFNKYLGICDTPDMADCEELPLPTTTTEMPPTSTTEE 257
            .|..|..|..:.||..|..:...|.....|::|.|.|..||.|..|..        .|...|:|.
  Fly   101 AHPDPAVCNIFYNCIEGDALETKCTVGLHFDEYSGTCVWPDTAKREGC--------NPEQRTSET 157

  Fly   258 DVVCGPTPEGIEED----YCVPKGNGFYEYPYNCSGYLACKNGCTDLDY-CQPDKLFNNWLHICD 317
            ..|| |..:...:|    ...||    |.:|.:|..:..|.||....|. ||..:::|:...:||
  Fly   158 GFVC-PKDQPKTDDRGQVVTHPK----YPHPTDCQKFYVCLNGEDPRDLGCQLGEVYNDATEMCD 217

  Fly   318 TPDSV 322
            .|::|
  Fly   218 APENV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342 15/39 (38%)
CBM_14 185..237 CDD:426342 16/51 (31%)
CBM_14 273..322 CDD:426342 15/49 (31%)
CBM_14 393..444 CDD:426342
CBM_14 485..539 CDD:426342
CBM_14 585..638 CDD:426342
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
obst-ANP_608378.2 CBM_14 27..77 CDD:426342 14/38 (37%)
CBM_14 95..143 CDD:426342 14/47 (30%)
CBM_14 180..225 CDD:426342 14/43 (33%)
Blue background indicates that the domain is not in the aligned region.

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