DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and cpg-1

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:891 Identity:186/891 - (20%)
Similarity:246/891 - (27%) Gaps:385/891 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 PSTPTTLPSDGSTTEIHSSTTEEIVTTTDGLPSDVDPNDCKDEKDGTIFAYIGNCS-EYLICKDN 417
            |...|||...|.    .|......|:..|.:..|   .||..::|| ::| ||.|| ::|.|...
 Worm    29 PLETTTLDGSGD----GSGADNGFVSGADAVAID---TDCSTKEDG-LYA-IGGCSPQFLTCSGG 84

  Fly   418 QVQMGHCPPNTLFNPDLLVCDEPDDVVCLGDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPD 482
            ..::..||.:.:::|.::.|:                                            
 Worm    85 ISRIMDCPADLIYDPRIVACE-------------------------------------------- 105

  Fly   483 QLCDGQELGASFSYPDDCSKYYLCLGGGQWTLAPCIYGSYFDPSTGQCGPDVAPDACKPSQVTTT 547
                       :||                             :..|||.       .|..||:|
 Worm   106 -----------YSY-----------------------------NVPQCGG-------VPQDVTST 123

  Fly   548 TTTTTTETTTT-------ERNTTPKSTATTTERTTTTVAPKTGICGGRNENENIAYPNNCTKYIV 605
            .....:|.||.       |..|||....|..|.|||..                           
 Worm   124 QEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEA--------------------------- 161

  Fly   606 CVSPIPIAFFCPDGTFFSSKLEKCIDDWDESDCEGDQSTTTLEPGYTRPPPEPTMCTNSSRDTFP 670
                     :.|            :||:         ||||  |....|.|..|..:       |
 Worm   162 ---------YAP------------VDDY---------STTT--PAEDVPVPVETTAS-------P 187

  Fly   671 YPDNCQWFIRCVDDYIYMMDVCNCGEYYDPITEKCGADVPSDACRWDYTSTTSTTSEPTTTTAVT 735
            |.                           ||       ||       ||:......||.|.:|||
 Worm   188 YA---------------------------PI-------VP-------YTTGAPAADEPVTRSAVT 211

  Fly   736 RPPPQKGPCDDVEDGALVAYP-NDCS-KYIQCDRPIAVAFECEKGDEFSVELGKCVDASLANCSI 798
            :      .|....||   .|. .:|| .|..|.....:..:|.....|        |.:...|..
 Worm   212 K------SCVGKADG---FYSFGECSDHYTACSNGYLIPMQCPARLAF--------DEARVICDY 259

  Fly   799 TTTAKPSESTTTPRDGEGSTTPSEPSTGSSTESSTESTTEPSTESTTESTTESTTESTTESSTGQ 863
            ....                  .|.:.||..:..          |..|:|.||:.|....:..|.
 Worm   260 VMNV------------------PECTNGSGNDEG----------SADETTPESSGEMPYSNGYGY 296

  Fly   864 STETTESSTVLSTDTSESPSTIS----TPPSSTTME--PGTT---NPEASTTEKPADGICEGKTD 919
            ...||.:..|.||.....|...:    .|...||.|  |.||   .||...|..|          
 Worm   297 EETTTVAEDVPSTKDYAEPIAAAYVARYPSEKTTAENVPTTTIGYEPEVVETTAP---------- 351

  Fly   920 DSLVPYPRNCSKYIKCQYPIPVGYDCPDGLEFSPTELTCMDPELAGCSTKLTTPGLTTLSTEASS 984
                        |:: :....|||                            .|.:...:||| .
 Worm   352 ------------YVE-ETTTTVGY----------------------------KPEVEETTTEA-E 374

  Fly   985 TPVTTVSTTPEATTTEMSTTPKTTTTESTTISTTTTDSTTPQTTTTESTTSKTTTTESTIISTTP 1049
            .|.|||...||...|   |.|        .:..|||.:..|.||.........||||:.:.:||.
 Worm   375 VPTTTVGYEPEIVET---TAP--------YVEETTTAADVPSTTAVYEPEVVETTTEAEVPTTTT 428

  Fly  1050 TTTEPTTPKTT------TTESTTIPTTTT-------ESTTATTTPQTTT-TESTTISTTPKTTTT 1100
            ...||...:||      ||.:..:||||.       |:||....|.||. .||..:.||.....|
 Worm   429 VGYEPEVVETTVPYVEETTTAADVPTTTVGYEPEVEETTTEAEVPTTTVGYESEVVETTAADIPT 493

  Fly  1101 ESTTVSTTPTTTESTTISTTPTTTEPTTVSTTPKTTTTESTTVTTTTESTTTVSTPTTLDPYTPN 1165
              ||:...|...||||.:..||||.|                ..||||....|...|.::|    
 Worm   494 --TTIGYAPIVVESTTAADVPTTTVP----------------AETTTEVPACVEGATAIEP---- 536

  Fly  1166 ICCGQALGTLLPYPNDCGRYVVCDYPIPYAVDCDEGTIFDDNLLQC 1211
              |.|             .|..|.........|:.|..|.....:|
 Worm   537 --CSQ-------------HYKNCVNGQEAIFICENGLFFSPEQARC 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342 14/51 (27%)
CBM_14 485..539 CDD:426342 5/53 (9%)
CBM_14 585..638 CDD:426342 3/52 (6%)
CBM_14 661..714 CDD:426342 6/52 (12%)
CBM_14 744..796 CDD:426342 11/53 (21%)
CBM_14 914..962 CDD:426342 4/47 (9%)
CBM_14 1175..1212 CDD:426342 6/37 (16%)
cpg-1NP_001021159.1 CBM_14 61..113 CDD:426342 16/137 (12%)
rne <116..206 CDD:236766 37/196 (19%)
CBM_14 214..266 CDD:426342 12/80 (15%)
rne <321..499 CDD:236766 63/242 (26%)
CBM_14 <539..576 CDD:426342 7/42 (17%)
Blue background indicates that the domain is not in the aligned region.

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