DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and CG43294

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001356903.1 Gene:CG43294 / 12798218 FlyBaseID:FBgn0262986 Length:143 Species:Drosophila melanogaster


Alignment Length:225 Identity:49/225 - (21%)
Similarity:72/225 - (32%) Gaps:93/225 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPWLLVVIAVFWSWQLNVLALPKIEPRHETCNNEQRYENQVMCEGKDFGALVPYPDNCSLFLVCD 73
            ||.::::.|||..:.:              ....||:               |:|::|..:    
  Fly     5 LPLIVLLCAVFSGFCM--------------AQTVQRW---------------PFPNDCHRY---- 36

  Fly    74 CLYPTVKL-CPANLWWDNKTQQCNYPQAVECIYYSIETPEPTDGTTRFTPEPTSSTQKITPEPTE 137
              |.|..| ||...:|:::..|||....|.|                      ||...|      
  Fly    37 --YETRLLDCPPEFYWNSQLLQCNSQTPVGC----------------------SSIDPI------ 71

  Fly   138 PPSSTAKITTESTTGTSTEITSSTPSSYLPTSSWDPPPAPPGISD--DYCRNKEDGSVHYYPYDC 200
                             |...:|.|:|        ||...|..||  ..|.||.:..:. ||.||
  Fly    72 -----------------TNWNNSYPNS--------PPIKEPENSDLTKLCENKLNQLIP-YPADC 110

  Fly   201 QAYINCTYGWPVLNYCIEDKVFNKYLGICD 230
            ..:|.|.| .|.:..|.:...:|..|..||
  Fly   111 TKFIRCDY-LPFVMCCPQYLYWNSQLLTCD 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342 13/52 (25%)
CBM_14 185..237 CDD:426342 16/46 (35%)
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342
CBM_14 485..539 CDD:426342
CBM_14 585..638 CDD:426342
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
CG43294NP_001356903.1 ChtBD2 96..139 CDD:214696 14/44 (32%)
Blue background indicates that the domain is not in the aligned region.

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