DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4835 and LOC1279248

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_318942.4 Gene:LOC1279248 / 1279248 VectorBaseID:AGAMI1_001027 Length:89 Species:Anopheles gambiae


Alignment Length:48 Identity:16/48 - (33%)
Similarity:24/48 - (50%) Gaps:0/48 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   923 VPYPRNCSKYIKCQYPIPVGYDCPDGLEFSPTELTCMDPELAGCSTKL 970
            :|:..:|:|:.||........|||.||.::..:..|..||.|.|...|
Mosquito    38 IPHFTDCTKFYKCFNGKKYEMDCPAGLHWNIEKDFCDFPEEANCERPL 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342
CBM_14 393..444 CDD:426342
CBM_14 485..539 CDD:426342
CBM_14 585..638 CDD:426342
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342 11/38 (29%)
CBM_14 1175..1212 CDD:426342
LOC1279248XP_318942.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.