DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4835 and LOC1277042

DIOPT Version :10

Sequence 1:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_316470.4 Gene:LOC1277042 / 1277042 VectorBaseID:AGAMI1_001650 Length:577 Species:Anopheles gambiae


Alignment Length:294 Identity:67/294 - (22%)
Similarity:99/294 - (33%) Gaps:74/294 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 VCGPTPEGIEEDYCVPKGNGFYEYPY----NCSGYLACKNGCTDLDYCQPDKLFNNWLHICDTPD 320
            :|....:.|......|:.||:|...:    :||.:..|.:|...|..|.....||..|.:||.||
Mosquito   328 ICQQAKQVIRRHGNCPRTNGYYPVMFRNEKDCSQFYQCDHGTAYLIQCPAGLHFNTRLSVCDYPD 392

  Fly   321 SVRCD-PLPFPTTPGTTN--KPTTPSVTTTPSITTT----PSTPTTLPSDGSTTEIHSSTTEEIV 378
            .|.|: |:......|..|  ...:||.....|.|:.    |..||                    
Mosquito   393 KVDCNGPVLNEHVTGGANGGHGGSPSCAVCQSATSVVHRHPQCPT-------------------- 437

  Fly   379 TTTDGLPSDVDPNDCKDEKDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLFNPDLLVCDEPDDV 443
                           ::.....:|.:..:|::|..|.........||....||..|.|||.|:.|
Mosquito   438 ---------------RNGPHPIMFRHRTDCTKYYQCDHGTAFEITCPAGLHFNTALSVCDYPERV 487

  Fly   444 VC------LGDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQELGASFSYPDDCSK 502
            .|      .|..:..|   .:......|..|.....|            |::..|.:::|.:|.|
Mosquito   488 GCSEGAEGSGGASEAP---AVDHPVVAKIHPNCPAVT------------GRQEPAYWAHPHECGK 537

  Fly   503 YYLCLGGGQW---TLAPCIYGSYFDPSTGQCGPD 533
            |:.|    ||   .|..|..|..:|.:...|.||
Mosquito   538 YFGC----QWGCVELLSCPAGHRWDDAQKACSPD 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342 17/52 (33%)
CBM_14 393..444 CDD:426342 13/50 (26%)
CBM_14 485..539 CDD:426342 16/52 (31%)
CBM_14 585..638 CDD:426342
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
LOC1277042XP_316470.4 None
Blue background indicates that the domain is not in the aligned region.

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