DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and GLR3.3

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001322169.1 Gene:GLR3.3 / 840859 AraportID:AT1G42540 Length:933 Species:Arabidopsis thaliana


Alignment Length:514 Identity:95/514 - (18%)
Similarity:157/514 - (30%) Gaps:226/514 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 VKNGRFDGMIG--ALIRNETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVF 434
            :..|.|||::|  |::.|.|.|              :|.. :.:::....:....:........|
plant   532 ITTGNFDGVVGDVAIVTNRTKI--------------VDFT-QPYAASGLVVVAPFKKLNSGAWAF 581

  Fly   435 LQPFTNDVWILIVGCGVLTV-FILWFL---TTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQE 495
            |:||...:| .:.||..|.| .::|.|   |..|::               .||:          
plant   582 LRPFNRLMW-AVTGCCFLFVGIVVWILEHRTNDEFR---------------GPPK---------- 620

  Fly   496 QVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERV 560
                                                    ::|.                     
plant   621 ----------------------------------------RQCV--------------------- 624

  Fly   561 GLFLESVLFFVGIICQQGLGFSTSFVS---------GRCIVITSLLFSFCIYQFYSASIVGTLLM 616
                 ::|:|         .|||.|.:         ||.::|..|.....|...|:||:...|  
plant   625 -----TILWF---------SFSTMFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSIL-- 673

  Fly   617 EKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMEL--YAKKITSVPTTKENEADEDEP 679
                |::.||    |.:| |:|. |..||      ||:..::  :|:..    ...|....|...
plant   674 ----TVQQLS----SPIK-GIES-LRERD------DPIGYQVGSFAESY----LRNELNISESRL 718

  Fly   680 VDPNPVSTDP--AKSYRDIVHSHETGAHAKDNAASNWLDPETGLLRHLGFAFHVDVA-------- 734
            |   |:.|..  ||:.:|                    .|..|     |.|..||..        
plant   719 V---PLGTPEAYAKALKD--------------------GPSKG-----GVAAIVDERPYVELFLS 755

  Fly   735 --AAYKIIAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYGLRRVTETGILTYHFNVW 797
              .||:|:.:.|::..     ....||         ::||:...:|..:..:.|.|.|....:.|
plant   756 SNCAYRIVGQEFTKSG-----WGFAFP---------RDSPLAIDLSTAILELAENGDLQRIHDKW 806

  Fly   798 HSRKPPCVKKIETSDLHVDMDTVSS----------ALLILLFSYAITLMILGTEILYSK 846
             ..|..|.  :|.::|..|...:.|          |.|:.||.|.:.::    ..||.|
plant   807 -LMKNACT--LENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQII----RQLYKK 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 22/98 (22%)
Lig_chan 563..828 CDD:278489 63/297 (21%)
GLR3.3NP_001322169.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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