DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and GLR1.1

DIOPT Version :10

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_187061.1 Gene:GLR1.1 / 819566 AraportID:AT3G04110 Length:808 Species:Arabidopsis thaliana


Alignment Length:450 Identity:90/450 - (20%)
Similarity:147/450 - (32%) Gaps:168/450 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 LNYGGHVNLTE-----IG--SFTP-TEGIQLHTWFRTTSTVRRRM----DMQHARV--------- 312
            :||..|..:|.     ||  |:.| :|.::     ..||.:|:||    :.:|:.|         
plant   258 MNYLEHFAITRSMQGVIGFKSYIPVSEEVK-----NFTSRLRKRMGDDTETEHSSVIIGLRAHDI 317

  Fly   313 RCMVVVTNKNMTGTLMYYLTHTMSGHIDTMNRFNFNLLMAVRDMFNWTFVLSRTTSWGYVKNGRF 377
            .|::....:..          ::||.::..:..:.:||..:|                   :.||
plant   318 ACILANAVEKF----------SVSGKVEASSNVSADLLDTIR-------------------HSRF 353

  Fly   378 DGMIGAL------IRNET----DIGGAPIFYWLERHKWIDV-AGRSWSSRPCFIF--------RH 423
            .|:.|.:      ..:||    :||       .|:.:.|.: :|.|:|.|...::        ||
plant   354 KGLSGDIQISDNKFISETFEIVNIG-------REKQRRIGLWSGGSFSQRRQIVWPGRSRKIPRH 411

  Fly   424 PRSTQKDRIVFLQPFT---NDVWILI-------VGCGVLTVFILWFLTTIEWKLVPHDGSALIKP 478
            ....:|.....|:...   |.|..|:       .|...::.|.:....|.   :.|.:......|
plant   412 RVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVFKTC---IAPFNYELEFIP 473

  Fly   479 KGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYED----STPIDAGTLWQRCY 539
            ..|......|....|:::.:|.|..||..|          .:..|.|    .|.|..|.|     
plant   474 YRGNNDNLAYLLSTQRDKYDAAVGDITITS----------NRSLYVDFTLPYTDIGIGIL----- 523

  Fly   540 QKLNKYIKDRKAKQKKA-------PERVGLFLESVLFFV--GIICQ----------QG------- 578
                      ..|:|..       |....|:|.|..|||  ||:..          ||       
plant   524 ----------TVKKKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVNPEFQGSWGQQLS 578

  Fly   579 ----LGFST---------SFVSGRCIVITSLLFSFCIYQFYSASIVGTLLMEKPKTIKTL 625
                .||||         ..:|.|.:||..:.....:...|||::..|      |||..:
plant   579 MMLWFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLILTSSYSANLTST------KTISRM 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 25/142 (18%)
Lig_chan 563..828 CDD:459656 24/94 (26%)
GLR1.1NP_187061.1 PBP1_GABAb_receptor_plant 31..397 CDD:380645 35/179 (20%)
Periplasmic_Binding_Protein_Type_2 421..737 CDD:473866 51/245 (21%)

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