DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and GLR3.5

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001324013.1 Gene:GLR3.5 / 817800 AraportID:AT2G32390 Length:953 Species:Arabidopsis thaliana


Alignment Length:507 Identity:81/507 - (15%)
Similarity:148/507 - (29%) Gaps:223/507 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 KNGRFDGMIGALIRNETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHP------------R 425
            ||..:|.:|..:..|..|:....:.....|.|::|             |..|            :
plant   541 KNPSYDNLISEVAANIFDVAVGDVTIITNRTKFVD-------------FTQPFIESGLVVVAPVK 592

  Fly   426 STQKDRIVFLQPFTNDVWILIVGCGVLTVF---ILWFLTTIEWKLVPHDGSALIKPKGGAPPRHH 487
            ..:.....||:|||.::|.:   .|.|.:|   ::|.|                        .|.
plant   593 GAKSSPWSFLKPFTIEMWAV---TGALFLFVGAVIWIL------------------------EHR 630

  Fly   488 YQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAK 552
            :                               .||:                             
plant   631 F-------------------------------NEEF----------------------------- 635

  Fly   553 QKKAPERVGLFLESVLFFVGIICQQGLGFSTSFVS---------GRCIVITSLLFSFCIYQFYSA 608
              :.|.|..:.  :|.:|         .|||.|.|         ||.:::..|.....|...|:|
plant   636 --RGPPRRQII--TVFWF---------SFSTMFFSHRENTVSTLGRFVLLVWLFVVLIINSSYTA 687

  Fly   609 SIVGTLLMEK-PKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMELYAKKITSVPTTKEN 672
            |:...|.::: ...|:.:..|:.|:..:|::|..:...:.::       ||.......:|...|.
plant   688 SLTSILTVQQLTSRIEGMDTLIASNEPIGVQDGTFAWKFLVN-------ELNIAPSRIIPLKDEE 745

  Fly   673 E---ADEDEP--------VDPNP-----VSTDPAKSYRDIVHSHETGAHAKDNAASNWLDPETGL 721
            |   |.:..|        ||..|     :|....| :|.:         .::...:.|       
plant   746 EYLSALQRGPRGGGVAAIVDELPYIKALLSNSNCK-FRTV---------GQEFTRTGW------- 793

  Fly   722 LRHLGFAFHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYGLRRVTE 786
                ||||                                      |::||:...:|..:.::.|
plant   794 ----GFAF--------------------------------------QRDSPLAVDMSTAILQLAE 816

  Fly   787 TGILTYHFNVWHSRKPPCVKKI-ETSDLHVDMDTVSSALLI--LLFSYAITL 835
            .|.|......|.:....|..:| :|.:..:.:.:.....||  :::..|:||
plant   817 EGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWGLFLICGVVWFIALTL 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 22/106 (21%)
Lig_chan 563..828 CDD:278489 51/293 (17%)
GLR3.5NP_001324013.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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