DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and GLR2.7

DIOPT Version :10

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_180476.3 Gene:GLR2.7 / 817460 AraportID:AT2G29120 Length:952 Species:Arabidopsis thaliana


Alignment Length:436 Identity:76/436 - (17%)
Similarity:131/436 - (30%) Gaps:163/436 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 PRSTQKDRIVFLQPFTNDVWILIVGCGVLTVFILWFLTTIEWKLVPHDGSALIKPKGGAPPRHHY 488
            |....|:..|||:|::.|:|:......|...||:|.|            ...:......||.|  
plant   567 PLKDNKNTWVFLRPWSLDLWVTTACFFVFIGFIVWIL------------EHRVNTDFRGPPHH-- 617

  Fly   489 QQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQ 553
                                                     ..||.:...:..:|      .|.:
plant   618 -----------------------------------------QIGTSFWFAFSTMN------FAHR 635

  Fly   554 KKAPERVGLFLESVLFFVGIICQQGLGFSTSFVSGRCIVITSLLFSFCIYQFYSASIVG--TLLM 616
            :|....:..|:..|..||.::                           :.|.|:|::..  |:.:
plant   636 EKVVSNLARFVVLVWCFVVLV---------------------------LIQSYTANLTSFFTVKL 673

  Fly   617 EKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMELYAKKITSVPTTKENEADEDEPVD 681
            .:| |:....||:..:..:|     |.|..|:.       ||          .|....||.: :.
plant   674 LQP-TVTNWKDLIKFNKNIG-----YQRGTFVR-------EL----------LKSQGFDESQ-LK 714

  Fly   682 P--NPVSTDPAKSYRDIVHSHETGAHAK-----DNAASNWLDPETGLLRHLGFAFHVDVAAAYKI 739
            |  :.|..|...|...|..|.:..|:.|     :::....::|.   .:..||.|          
plant   715 PFGSAVECDELFSNGTITASFDEVAYIKVILSQNSSKYTMVEPS---FKTAGFGF---------- 766

  Fly   740 IAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYGLRRVTETGILTYHFNVWHSRKPPC 804
                             :||         |.||:...:|..:..||:...:.:..|.|. :||..
plant   767 -----------------VFP---------KKSPLTDDVSRAILNVTQGEEMQHIENKWF-KKPNN 804

  Fly   805 VKKIET--SDLHVDMDTVSSALLILLFSYAITLMILGTEILYSKWH 848
            ...:.|  |..|:.:.:.....||...:..:.|:|.....||...|
plant   805 CPDLNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKH 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 13/40 (33%)
Lig_chan 563..828 CDD:459656 50/275 (18%)
GLR2.7NP_180476.3 PBP1_GABAb_receptor_plant 40..423 CDD:380645
GluR_Plant 460..799 CDD:270404 63/382 (16%)
Lig_chan 582..832 CDD:459656 65/401 (16%)
Blue background indicates that the domain is not in the aligned region.

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