DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and grin2da

DIOPT Version :10

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_073787594.1 Gene:grin2da / 449864 ZFINID:ZDB-GENE-041008-124 Length:1918 Species:Danio rerio


Alignment Length:657 Identity:108/657 - (16%)
Similarity:218/657 - (33%) Gaps:199/657 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LGGMNLYMNTELTLAKRMSEAAHYTLFDVWNPGLNYGGHVNLTEIGSFTPTEGI---QLHTWFRT 297
            |.|.:...|.:..||..:.:...||....|.            |:|.:  ..|:   :...|.|.
Zfish   392 LSGRDYSFNNDGYLANPLLDVISYTAGRGWE------------EVGWW--ENGVLRLRYPPWSRY 442

  Fly   298 TSTVRRRMDMQHAR--------------------------VRCMVVVTNK-NMTGTLMYYLTHTM 335
            ...::...|.||.|                          |.|.:.:.|: :|....:..:.|..
Zfish   443 GPFLKPLDDSQHLRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLPLNNRSSMVVEGIQSMKHCC 507

  Fly   336 SGHIDTMNRFNFNLLMAVRDMFNWTFVLSRTTSWGYVKN--GRFDGMIGALIRNETDIGGAPIFY 398
            .|       |..::|..:..:..:|:.|...|:..:.||  |:::||:|.::....|:....:..
Zfish   508 KG-------FCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGQWNGMVGEVVSKRADMAIGSLTI 565

  Fly   399 WLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILI-VGC---GVLTVFILWF 459
            ..||.:.::.:.....:....:......|.... .||:|::..||::: |.|   ..:||||..|
Zfish   566 NEERSEVVEFSVPFVETGISVMVSRSNGTVSPS-AFLEPYSPAVWVMMFVMCLSVVAVTVFIFEF 629

  Fly   460 LTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYE 524
            .:.:.:......|    |..||:                         ...:.|           
Zfish   630 FSPVGYNRSLQSG----KTAGGS-------------------------KFTIGK----------- 654

  Fly   525 DSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTSFVSGR 589
                    ::|                           .|.:::|...:..:...|     .:.:
Zfish   655 --------SIW---------------------------LLWALVFNNSVPVENPRG-----TTSK 679

  Fly   590 CIVITSLLFSFCIYQFYSASIVGTLLMEKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPV 654
            .:|:....|:......|:|::...::.|  :.|.|:|         |:.|     ..|.|     
Zfish   680 IMVLVWAFFAVIFLASYTANLAAFMIQE--EYIDTVS---------GLSD-----KKFQH----- 723

  Fly   655 SMELYAK-KITSVP--TTKENEADEDEPVDPNPVSTDPAKSYRDIVHSHETGAH-AKDNAASNWL 715
            ..|.|.. :..:||  :|:||            :.::....::.:|.:::.|.. |.:|..:..|
Zfish   724 PTEQYPPLRFGTVPNGSTEEN------------IRSNYPNMHQYMVRNNQRGVEDAIENLKTGKL 776

  Fly   716 DPETGLLRHLGFAFHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYG 780
            |           ||..| ||....:|.......:..:....:|........:.|||..::.:...
Zfish   777 D-----------AFIYD-AAVLNYMARKDEGCKVMTIGSGKVFATTGYGVALHKNSRWKRPLDLA 829

  Fly   781 LRRVTETGILTYHFNVW-----HSRKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITLMILGT 840
            |.::.....:.....:|     |:      .|||.....:|:|.::....:||.:..::|::...
Zfish   830 LLQLVGDDEIDMLERLWLSGICHN------DKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAW 888

  Fly   841 E-ILYSK 846
            | ::|.|
Zfish   889 EHLVYWK 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 25/119 (21%)
Lig_chan 563..828 CDD:459656 46/273 (17%)
grin2daXP_073787594.1 None

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