DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and CG11155

DIOPT Version :10

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:957 Identity:165/957 - (17%)
Similarity:302/957 - (31%) Gaps:317/957 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QRTSLLQSSLILQFSQDYKHIPRITYFTCQK----------------------PHLQT---PNQI 73
            ::|.|..:.|:    .|.:::||...|...|                      .|:|:   ...|
  Fly    72 EKTLLPNTQLV----YDIEYVPRDDSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDI 132

  Fly    74 PNAAEHRD-AFAAKNFQLIKSLYESELFVRIVLLDVLA----------QSPTSGRPNRPGNGPTG 127
            |:.....| .:.:|.|.:  :||.|...:.:...|::.          .....|..|..      
  Fly   133 PHIEGRIDLEYNSKEFSI--NLYPSHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLM------ 189

  Fly   128 GFSQTPSQA-----QSNSEWLEGVLRMEALRQ----IAVVDLACGAVSRRFLELASAKMLYSEKF 183
             .|.|.::|     |::.:....|||  |:||    ..:||.....:...|..:...:| ...::
  Fly   190 -HSSTETKAEMYIRQASPDSYRQVLR--AIRQKEIYKIIVDTNPSHIKSFFRSILQLQM-NDHRY 250

  Fly   184 HWLL---------IEDFAWHGRTQTA----EGSGKR---DDGEMEEEEPPG-------QQIQATD 225
            |::.         :|||.::....||    :...||   ...:|::.:..|       ..||...
  Fly   251 HYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTES 315

  Fly   226 DEDLPSIESFLGGM---------NLYMNTELTLAKRMSEAAHYTLFDVWNPGLNYGGHVN----- 276
            .....|:.:|..|:         |.|:       |.:|..:..|    ||.|::....:|     
  Fly   316 ALMFDSVYAFANGLHFLNLDNHQNFYI-------KNLSCTSDQT----WNDGISLYNQINAAITD 369

  Fly   277 ---------------------------LTEIGSFTPTEGIQLH--TWF------RTTSTVRRRMD 306
                                       :.::|.:.|.:|:.:.  |.|      ..|..|..|.:
  Fly   370 GLTGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITLVVMTREE 434

  Fly   307 MQHARVRCMVVVTNKNMTGTLMY--YLTHTMSGHIDTMNRFNFNLLMAVRDMFNWTFVLSRTTSW 369
            ..:..|:     .:||:||.|.:  :....:.. |.|...|.:.:.:...:|:.  ..:..|.||
  Fly   435 RPYVMVK-----EDKNLTGNLRFEGFCIDLLKA-IATQVGFQYKIELVPDNMYG--VYIPETNSW 491

  Fly   370 GYVKNGRFDGMIGALIRNETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVF 434
                    :|::..|:....|:..|.:.....|...||......:.....:|:.|.|.......|
  Fly   492 --------NGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSF 548

  Fly   435 LQPFTNDVWILIVGCGVLTVFILWFL---TTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQ 496
            :.|...::|:.::...:|..|.|:.:   :..||| .||.                         
  Fly   549 MNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWK-NPHP------------------------- 587

  Fly   497 VEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVG 561
                                                     ||            |:....|...
  Fly   588 -----------------------------------------CY------------KETDIVENQF 599

  Fly   562 LFLESVLFFVGIICQQGLGFSTSFVSGRCIVITSLLFSFC--IYQFYSASIVGTLLMEKP-KTIK 623
            ....|..|..|...:||.|.:....|.|  ::....|.||  |...|:|::...|.:|:. ..|:
  Fly   600 SISNSFWFITGTFLRQGSGLNPKATSTR--IVGGCWFFFCLIIISSYTANLAAFLTVERMISPIE 662

  Fly   624 TLSDLVHSSLKVGMEDILY-------NRDYFLHTKDPVSMELYAKKITSVPTTKENEADEDEPVD 681
            :.|||...:      :|.|       ...:|..:|    :.:|.|....:...|           
  Fly   663 SASDLAEQT------EISYGTLEGGSTMTFFRDSK----IGIYQKMWRYMENRK----------- 706

  Fly   682 PNPVSTDPAKSYRDIVHSHETGAHAKDNAASNWLDPETGLLRHLGFAFHVDVAAAYKIIAETFSE 746
                :....|:|.|.:.....|::|       :|...|.|                     .::.
  Fly   707 ----TAVFVKTYEDGIKRVMEGSYA-------FLMESTML---------------------DYAV 739

  Fly   747 QDICDLTEVSMFPPQKTVSI-MQKNSPMRKVISYGLRRVTETGILTYHFNVWHSRKPPCV----K 806
            |..|:||::......|...| ..|.||.|..||..:..:.|.||:...::.|........    |
  Fly   740 QRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDK 804

  Fly   807 KIETSDLHVDMDTVSSALLILLFSYAITLMILGTEILYSKWHNRIQL 853
            ..|:....:.::.:....::||...|:.:::...|..   |::|..|
  Fly   805 SKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFC---WNSRKNL 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 20/116 (17%)
Lig_chan 563..828 CDD:459656 53/279 (19%)
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 62/367 (17%)
PBP2_iGluR_Kainate 424..793 CDD:270432 92/518 (18%)
Lig_chan 554..828 CDD:459656 68/407 (17%)

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