Protein Alignment Ir64a and KaiR1D

DIOPT Version :10

• Sequence 1: NP_647962.1
• Gene: Ir64a / 38616
• FlyBaseID: FBgn0035604
• Length: 859
• Species: Drosophila melanogaster
• Sequence 2: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Alignment Length: 611
• Identity: 118/611 - (19%)
• Similarity: 199/611 - (32%)
• Gaps: 179/611 - (29%)

  Fly   277 LTEIGSFTPTEGIQLHTWFRT-------TSTVRRRMDMQHARVRCMVVVTNKNMTGTLMYYLTHT 334
            :.:|...||....::.||..|       |.|..::.....|.::      ||.:..|.:....:.
  Fly   371 MLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLK------NKTLVVTTILSNPYC 429

  Fly   335 M--------SGHIDTMNRFNFNLLMAVRDM--FNWTFVLSRTTSWGYVK--NGRFDGMIGALIRN 387
            |        ||: |....:..:|:..:...  ||:...|....|:|.:.  .|.::|||..|:..
  Fly   430 MRKESAIPLSGN-DQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQ 493

  Fly   388 ETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILI----VG 448
            ..|:..|.:....||.:.:|......:.....::|.|.....:...||.|.:.||||.:    :|
  Fly   494 RADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLG 558

  Fly   449 CGVLTVFILWFLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSK 513
            ..|| :|||...|..||       .|.....|
  Fly   559 VSVL-LFILAKFTPYEW-------PAYTDAHG--------------------------------- 582

  Fly   514 EKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQG 578
            ||||.:            .||                             |..:.|.:|.:.|||
  Fly   583 EKVESQ------------FTL-----------------------------LNCMWFAIGSLMQQG 606

  Fly   579 LGFSTSFVSGRCIVITSLLFSFCIYQFYSASIVGTLLMEK-PKTIKTLSDLV------HSSLKVG 636
            ..|....:|.|.:......|:..:...|:|::...|.:|: ...|::..||.      :.:||.|
  Fly   607 CDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALKGG 671

  Fly   637 MEDILYNRDYFLHTKDPVSMELYAKKITSVPTTKENEADEDEPVDPNPVSTDPAKSYRDIVHSHE 701
            .....: ||..:.|...:...:.:.: .||.|....|..|
  Fly   672 STAAFF-RDSKISTYQRMWSFMESAR-PSVFTASNGEGVE------------------------- 709

  Fly   702 TGAHAKDNAASNWLDPETGLLRHLGFAFHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQKTVSI 766
              ..||...:..:|...|.:                    |..:|:: |:||:|......|:..|
  Fly   710 --RVAKGKGSYAFLMESTSI--------------------EYVTERN-CELTQVGGMLDTKSYGI 751

  Fly   767 -MQKNSPMRKVISYGLRRVTETGILTYHFNVWHSRKPPCVK-KIETSDL-----HVDMDTVSSAL 824
             ...|||.|..|:..:.::.|.|.|......|...|....| ::|||..     .:.:..|....
  Fly   752 ATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVF 816

  Fly   825 LILLFSYAITLMILGTEILYSKWHNR 850
            ::|:....:..:|...|.:   |.:|
  Fly   817 VVLMGGMGVACVIAVCEFV---WKSR 839

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir64a	NP_647962.1	Periplasmic_Binding_Protein_Type_2	351..>465	CDD:473866	31/121 (26%)
		Lig_chan	563..828	CDD:459656	55/278 (20%)
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	6/28 (21%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	98/502 (20%)