DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and Ir68b

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:542 Identity:94/542 - (17%)
Similarity:177/542 - (32%) Gaps:185/542 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 VRDMFN--WTFVLSR-TTSWG-YVKNGRFDGMIGALIRNETDIGGAPIFYWLERHKW--IDVAGR 411
            |.:|.|  .|:|... ..|:| .:.||.:.|::..::...|..  ||...::....|  ::|. .
  Fly   226 VGEMLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGGHTHF--APNSRFVLDCIWPAVEVL-Y 287

  Fly   412 SWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILIVGCGVLTVFILWFLTTIEWKLVPHDGSALI 476
            .::.|...:.....:.|.:.::|::.|...||.|::...::.|.:.|.:..::.::         
  Fly   288 PYTRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRI--------- 343

  Fly   477 KPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQK 541
             |:.|.                                              |.....|   |:.
  Fly   344 -PRRGV----------------------------------------------IQFQATW---YEI 358

  Fly   542 LNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTSFVSGRCIVITSLLFSFCIYQFY 606
            |..:.|..                     ||    :..|..:||.|.|..::..:|||:.:...|
  Fly   359 LEMFGKTH---------------------VG----EPAGRLSSFSSMRTFLMGWILFSYVLSTIY 398

  Fly   607 SASI-VGTLLMEKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMELYAKKITSVPTTK 670
            .|.: .|.:.....:.:..:.||||..:.:.....:|:.     .:..::...|.        ..
  Fly   399 FAKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYDA-----VRSALTEHQYG--------LL 450

  Fly   671 ENEADEDEPVDPNPVSTDPAKSYRDIVHSHETGA-------HAKDNAASNWLDPETGLLRHLGFA 728
            ||.:.:    .|..::|   ..|:.:|...:..|       ||:|..|..:   ::...|.   |
  Fly   451 ENRSRQ----LPLGIAT---SYYQPVVRRRDRRAAFIMRDFHARDFLAITY---DSQAERP---A 502

  Fly   729 FHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYGLRRVTE--TGILT 791
            :|         ||..:....||             ..|:.:.||.       |.|:..  :|.|.
  Fly   503 YH---------IAREYLRSMIC-------------TYILPRGSPF-------LHRLESLYSGFLE 538

  Fly   792 YHFNVWHSRKPPCVKKIETS--------DL--HVDMDTVSSALLI----------------LLFS 830
            :.| ..|.|:...:.::..|        ||  ..|.|:.|:.|.|                .|:|
  Fly   539 HGF-FEHWRQMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYLWS 602

  Fly   831 YAITLMILGTEILYSKWHNRIQ 852
            ..|.:..||..:.::.|..|.|
  Fly   603 VGIGISCLGFAVEHAHWFWRRQ 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 24/117 (21%)
Lig_chan 563..828 CDD:278489 55/300 (18%)
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 66/413 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462983
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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