DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and GRIN2C

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:671 Identity:114/671 - (16%)
Similarity:227/671 - (33%) Gaps:193/671 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 SFLGGMNLYMNTELTLAKRMSEAAHYTLFDVWNPGLNYGGHVNLTEIGSFTPTEGIQLHTWFRTT 298
            ||..|..|...|.:.:|  ::....:.:...|..|:.|                 ::...|.|.:
Human   421 SFSPGGYLVQPTMVVIA--LNRHRLWEMVGRWEHGVLY-----------------MKYPVWPRYS 466

  Fly   299 STVRRRMDMQHARV-----RCMVVVTNKNMTGT---------LMYYLTHTM-SGHIDTMNR---- 344
            ::::..:|.:|..|     |..|:|.:.: .||         ......||. ||.:....:    
Human   467 ASLQPVVDSRHLTVATLEERPFVIVESPD-PGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCK 530

  Fly   345 -FNFNLLMAVRDMFNWTFVLSRTTSWGYVK--NGRFDGMIGALIRNETDIGGAPIFYWLERHKWI 406
             |..::|..:..:..:::.|...|:..:.|  .|.::||||.:.....|:....:....||.:.:
Human   531 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIV 595

  Fly   407 D-------------VAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILI-VGC---GVLTV 454
            |             ||..:.:..|.              .||:|::..||::: |.|   ..:||
Human   596 DFSVPFVETGISVMVARSNGTVSPS--------------AFLEPYSPAVWVMMFVMCLTVVAITV 646

  Fly   455 FILWFLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEK 519
            |:..:.:.:.:......|.     |.|.|                        :..:.|      
Human   647 FMFEYFSPVSYNQNLTRGK-----KSGGP------------------------AFTIGK------ 676

  Fly   520 QEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTS 584
                         ::|                           .|.:::|...:..:...|    
Human   677 -------------SVW---------------------------LLWALVFNNSVPIENPRG---- 697

  Fly   585 FVSGRCIVITSLLFSFCIYQFYSASIVGTLLMEK-PKTIKTLSDLVHSSLKVGMEDILYN----- 643
             .:.:.:|:....|:......|:|::...::.|: ..|:..|||  ..||.:....:.:.     
Human   698 -TTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSD--KKSLHLENTGVAWTAFKTF 759

  Fly   644 -RDYFLHTKDPVSMELYAKKITSVP--TTKENEADEDEPVDPNPVSTDPAKSYRDIVHSHETGAH 705
             .|||...:|    :....:..:||  :|:.|.......:..:.|..: .:|..|.:.|.:.|:.
Human   760 CSDYFQRPQD----QYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFN-QRSVEDALTSLKMGSE 819

  Fly   706 AKDNAASNWLDPETGLLRHLGFAFHVDVAAAYKIIAETFSEQDICDLTEV---SMFPPQKTVSIM 767
            |:  .....||           ||..|.|    ::.....:.:.|.|..:   .:|........|
Human   820 AQ--PVPRKLD-----------AFIYDAA----VLNYMAGKDEGCKLVTIGSGKVFATTGYGIAM 867

  Fly   768 QKNSPMRKVISYGLRRVTETGILTYHFNVWHSRKPPCV-KKIETSDLHVDMDTVSSALLILLFSY 831
            ||:|..::.|...|.:....|.......||.|  ..|. :|.|.....:|:|.::....:||.:.
Human   868 QKDSHWKRAIDLALLQFLGDGETQKLETVWLS--GICQNEKNEVMSSKLDIDNMAGVFYMLLVAM 930

  Fly   832 AITLMILGTE-ILYSKWHNRI 851
            .:.|::...| ::|.|..:.:
Human   931 GLALLVFAWEHLVYWKLRHSV 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 25/132 (19%)
Lig_chan 563..828 CDD:278489 52/277 (19%)
GRIN2CXP_016880033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156117
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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