DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and glr-8

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:527 Identity:91/527 - (17%)
Similarity:166/527 - (31%) Gaps:167/527 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 LLMAVRDMFNWTFVL--SRTTSWGYVKNGRFDGMIGALIRNETDI--GGAPIFYWLERHKWIDVA 409
            :|..:....|.|:.:  :..::||...||.:.|..|.|:|.|.|:  |||.:.|  :|....|:.
 Worm    99 ILKEIGKRLNLTYEILPALGSTWGEYLNGSWTGAFGQLVRGEVDLLAGGAIMEY--DRSVIADLT 161

  Fly   410 GRSWSSRPCFIFRHPRSTQKDRIVFL-QPFTNDVWILIVGCGVLTVFILWFLTTIEWKLVPHDGS 473
            ..........:.|.|...:.|.::.: :||:.:||::.....:::..|...:|.|          
 Worm   162 YPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNI---------- 216

  Fly   474 ALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRC 538
                                       :|.:                  ||:.|...        
 Worm   217 ---------------------------IRKV------------------YEEMTVTP-------- 228

  Fly   539 YQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTSFVSGRCIVITSLLFSFCIY 603
                                     .||:..|..|..||||.......|.|.:|....|.|..:.
 Worm   229 -------------------------FESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLS 268

  Fly   604 QFYSASIVGTLLMEKPKT-IKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMELYAKKITSVP 667
            ..::.|:|....::|... .:.:..||. .:|.|..:|:.:.:.|..|      |:.|:  :.:|
 Worm   269 ATFTGSLVALFAVDKTNVPFQNIDQLVR-LVKQGKFEIVMDENSFTRT------EMIAR--SKLP 324

  Fly   668 TTKENEADEDEPVDPNPVSTDPAKSYRDIVH----SHETG---------AHAKDNAASNWLDPET 719
            .                        |||:.|    :|:..         |..:.|.....|.|  
 Worm   325 V------------------------YRDLWHEMIVNHKVKYVNGIARGVAFVRANPGYALLGP-- 363

  Fly   720 GLLRHLGFAFHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYGLRRV 784
              :..|.|..:.|.    |:|           |....:.|...::.:: |||......|..:|.:
 Worm   364 --MATLNFYAYSDC----KVI-----------LFNDGILPVYLSIPLV-KNSIYSPYFSTKIREM 410

  Fly   785 TETG-----ILTYHFNVWHSRKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITLMILGTEILY 844
            .|.|     |..|...|...:...|.........::|:.....|..:.|....:.|.:...|.::
 Worm   411 VERGFTQKWIADYRSYVAMQKINECNSTTIGPKSYLDLKRAQGAFWVFLGGAGLGLALFVGEFIF 475

  Fly   845 SKWHNRI 851
            ..:..::
 Worm   476 KFFREKM 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 28/118 (24%)
Lig_chan 563..828 CDD:278489 55/283 (19%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 83/467 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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