DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and GRIN3A

DIOPT Version :10

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_597702.2 Gene:GRIN3A / 116443 HGNCID:16767 Length:1115 Species:Homo sapiens


Alignment Length:953 Identity:181/953 - (18%)
Similarity:310/953 - (32%) Gaps:285/953 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLVFLPLSCQGLPEHELLELELDYGLAEPQRTSLLQSSLILQFSQDYKHIPRITYFTCQKP---- 65
            ||.| |.| ||    |::||:|              .||:|       |||.|:....:.|    
Human   196 LLAF-PQS-QG----EMMELDL--------------VSLVL-------HIPVISIVRHEFPRESQ 233

  Fly    66 ---HLQ--TPNQIPNAAEHRDAFAAK----NFQLIKSLYESELFVRIVLLDVLAQSPTSGRPNRP 121
               |||  ..|.:.:.|:...:....    ||.|:  |.:.:..:...||  |.|:.:...    
Human   234 NPLHLQLSLENSLSSDADVTVSILTMNNWYNFSLL--LCQEDWNITDFLL--LTQNNSKFH---- 290

  Fly   122 GNGPTGGFSQTPSQAQSNSEWLEGV-LRMEALRQI--AVVDLACGAVS-RRFLELASAKMLYSEK 182
                .|......:...|..:.|..: :::|:::..  .||...|...| ||..|:.:...:...:
Human   291 ----LGSIINITANLPSTQDLLSFLQIQLESIKNSTPTVVMFGCDMESIRRIFEITTQFGVMPPE 351

  Fly   183 FHWLL-----IEDFAWHGRTQTAEGSGKRDDGEMEEEEPPGQQIQATDDEDLPSIESFLGGMNLY 242
            ..|:|     :|:....|........||......|.......::.|........|:..|..:...
Human   352 LRWVLGDSQNVEELRTEGLPLGLIAHGKTTQSVFEHYVQDAMELVARAVATATMIQPELALIPST 416

  Fly   243 MN------TELTLAKRMSEAAHYTLFD---------------------VWNPGLNYGGHVNLTEI 280
            ||      |.||..:.:|.....|.|.                     :||...:..|....|.:
Human   417 MNCMEVETTNLTSGQYLSRFLANTTFRGLSGSIRVKGSTIVSSENNFFIWNLQHDPMGKPMWTRL 481

  Fly   281 GSFT-----------PTEGIQLHTWFRTTSTVRRRMD--MQH---------------ARVRCMVV 317
            ||:.           |.:..:..|.|:..|.:..|:.  ::|               |...|:..
Human   482 GSWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDDEGLCPAGQLCLDP 546

  Fly   318 VTNKNMTGTLMYYLTHTMSGHIDTMNR-----FNFNLLMAVRDMFNWTFVL-----SRTTSWGYV 372
            :||.:.|...::...|:.:..:....:     :..:||..:.:..|:.|.|     .:..:|   
Human   547 MTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVGDGKYGAW--- 608

  Fly   373 KNGRFDGMIGALIRNETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQP 437
            |||.:.|::|.|:|....:..........|.:.||.....:|:....:.| .|.|......|:.|
Human   609 KNGHWTGLVGDLLRGTAHMAVTSFSINTARSQVIDFTSPFFSTSLGILVR-TRDTAAPIGAFMWP 672

  Fly   438 FTNDVWI-LIVGCGVLTVFILWFLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPV 501
            ....:|: :.|...:..|    |||..|||          .|.|..|                  
Human   673 LHWTMWLGIFVALHITAV----FLTLYEWK----------SPFGLTP------------------ 705

  Fly   502 RPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKL---NKYIKDRKAKQKKAPERVGLF 563
                         |...:.:.:..|:.::.      ||..|   ...||..|.       ..|.|
Human   706 -------------KGRNRSKVFSFSSALNI------CYALLFGRTVAIKPPKC-------WTGRF 744

  Fly   564 LESVLFFVGIICQQGLGFSTSFVSGRCIVITSLLFSFCIYQFYSASIVGTLLMEKPKTIKTLSDL 628
            |.::.   .|.|.                       ||: ..|:|::...::.||          
Human   745 LMNLW---AIFCM-----------------------FCL-STYTANLAAVMVGEK---------- 772

  Fly   629 VHSSLKVGMEDILY---NRDYFLHTKDPVSMELYAKKITSVPTTKENEADEDEPVDPNPV---ST 687
            ::..|. |:.|...   ::.:...|....|.|.|.::  |.|...|.....:.|..|:.|   ..
Human   773 IYEELS-GIHDPKLHHPSQGFRFGTVRESSAEDYVRQ--SFPEMHEYMRRYNVPATPDGVEYLKN 834

  Fly   688 DPAKSYRDIVHSHETGAHAKDNAASNW---LDPETGLLRHLGFAFHVDVAAAYKIIAETFSEQDI 749
            ||.|          ..|...|.|..::   :|.:..||. :|..|.::   .|.|          
Human   835 DPEK----------LDAFIMDKALLDYEVSIDADCKLLT-VGKPFAIE---GYGI---------- 875

  Fly   750 CDLTEVSMFPPQKTVSIMQKNSPMRKVISYGLRRVTETGILTYHFNVWHSRKPPCVKK--IETSD 812
                   ..||         |||:...||..:.:....|.:....:.|: |..||.|:  ..|..
Human   876 -------GLPP---------NSPLTANISELISQYKSHGFMDMLHDKWY-RVVPCGKRSFAVTET 923

  Fly   813 LHVDMDTVSSALLILLFSYAITLM-ILGTEILYSKWHNRIQLK 854
            |.:.:...|...::|...:.:::: .:|..|:|.....||:.|
Human   924 LQMGIKHFSGLFVLLCIGFGLSILTTIGEHIVYRLLLPRIKNK 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 26/119 (22%)
Lig_chan 563..828 CDD:459656 52/275 (19%)
GRIN3ANP_597702.2 PBP1_iGluR_NMDA_NR3 40..496 CDD:380600 67/338 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..118
PBP2_iGluR_NMDA_Nr3 512..908 CDD:270438 95/537 (18%)
Lig_chan 674..941 CDD:459656 74/405 (18%)
PPP2CB binding site. /evidence=ECO:0000250|UniProtKB:Q9R1M7 951..987 6/16 (38%)
GIT1-binding. /evidence=ECO:0000250|UniProtKB:Q9R1M7 1062..1095
Blue background indicates that the domain is not in the aligned region.

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