DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and grin2ba

DIOPT Version :10

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001429729.1 Gene:grin2ba / 110438919 ZFINID:ZDB-GENE-090821-2 Length:1606 Species:Danio rerio


Alignment Length:900 Identity:151/900 - (16%)
Similarity:279/900 - (31%) Gaps:311/900 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LPEHELLELELDYGLAEPQR-TSLLQSSLILQFSQDYKHIPRITYFTCQKPHLQ-------TPNQ 72
            |.|..||::.:|.|.|:.|. ...|||.:||.:|.  |....|.:.......|.       .|:.
Zfish   247 LEEVLLLDMSVDDGDAKIQNLLKKLQSPVILLYST--KEEANIIFQVAHSVGLTGYGYTWIVPSL 309

  Fly    73 IPNAAEHRDAFAAKNFQLIKSLYESELFVRIVLLDVLAQSPTSGRPNRPGNGPTGGFSQTPSQAQ 137
            :...|:|                                        .|...|||..|      .
Zfish   310 VAGDADH----------------------------------------IPAEFPTGMIS------V 328

  Fly   138 SNSEWLEGVLRMEALRQIAVVDLACGAVSRRFLELASAKMLYSEKFHWLLIEDFAWHG---RTQT 199
            |..||..|   :||..:..|..:|          .|::.|:.....|.||..:  .||   :...
Zfish   329 SYDEWDYG---LEARVRDGVAVIA----------TATSTMMMDRGPHTLLKSE--CHGAPDKKSP 378

  Fly   200 AEGSGKRDDGEMEEEEPPGQQIQATDDEDLPSIESFLGGMNLYMNTELTLAKRMSEAAHYTLFDV 264
            ..|:.......:......|:.:..::|           |..::....:.|..:..:         
Zfish   379 MTGNNNEVLRYLMNVTFEGRNLSFSED-----------GYQMHPKLVIILLDKERQ--------- 423

  Fly   265 WNPGLNYGGHVNLTEIGSFTPTEGIQLHTW--FRTTSTVRRRMDMQHARVRCM-----VVVTNKN 322
            |:       .|...|.||.:    ::.|.|  |...|....|.| .|..:..:     |:|.:.:
Zfish   424 WD-------RVGKWENGSLS----MKYHVWPRFELYSGPEARED-DHLSIVTLEEAPFVIVEDVD 476

  Fly   323 -MTGTLM--------------------YYLTHTMSGHIDTMNRFNFNLLMAVRDMFNWTFVLSRT 366
             ::||.|                    .|:.....|       |..::|..:.....:|:.|...
Zfish   477 PLSGTCMRNTVPCRKQLKALNQTQDSAVYIKRCCKG-------FCIDILKKIAKNVKFTYDLYLV 534

  Fly   367 TSWGYVK--NGRFDGMIGALIRNETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQK 429
            |:..:.|  ||.::||:|.::.....:....:....||.:.||.:.....:....:......|..
Zfish   535 TNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVS 599

  Fly   430 DRIVFLQPFTNDVWILIVGCGVLTVFILWFLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQ 494
            .. .||:||:.||||:        :|::..|                                  
Zfish   600 PS-AFLEPFSADVWIM--------MFVMLLL---------------------------------- 621

  Fly   495 EQVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPER 559
                     ::|::|.:           :|..:|:.    :.||       :.|  .::...|. 
Zfish   622 ---------VSAIAVFI-----------FEYFSPVG----YNRC-------LAD--GREAGGPS- 652

  Fly   560 VGLFLESVLFFVG--IICQQGLGFSTSF-------VSGRCIVITSLLFSFCIYQFYSASIVGTLL 615
                     |.:|  |....||.|:.|.       .:.:.:|.....|:......|:|::...::
Zfish   653 ---------FTIGKAIWLLWGLVFNNSVPVQNPRGTTSKIMVSVWAFFAVIFLASYTANLAAFMI 708

  Fly   616 MEKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMELYAKKITSVPTTK-ENEADEDEP 679
            .|:                                        |..:::.:...| :|..|...|
Zfish   709 QEE----------------------------------------YVDQVSGLSDKKFQNPNDFSPP 733

  Fly   680 -----VDPNPVSTDPAKSYRDIVHSHETGAHAKDNAASNWLDPETGLLRHLGFAFHVDVAAAYKI 739
                 |.......:...:||| :||:....|.: |........:||.|.    ||..|.|    :
Zfish   734 FRFGTVPNGSTERNIRNNYRD-MHSYMVKFHQR-NVVEALESLKTGKLD----AFIYDAA----V 788

  Fly   740 IAETFSEQDICDLTEV---SMFPPQKTVSIMQKNSPMRKVISYGLRRVTETGILTYHFNVW---- 797
            :.......:.|.|..:   .:|........:||:|..::.:...:.::...|.:.....:|    
Zfish   789 LNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI 853

  Fly   798 -HSRKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITLM-ILGTEILYSKWHNR 850
             |..|    .::.:|.|  |:|.::....:|..:.|::|: .:...:.|  ||.|
Zfish   854 CHHEK----NEVMSSQL--DVDNMAGVFYMLGAAMALSLITFIAEHVFY--WHMR 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 24/115 (21%)
Lig_chan 563..828 CDD:459656 46/287 (16%)
grin2baNP_001429729.1 None

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