DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir64a and LOC110438919

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:900 Identity:151/900 - (16%)
Similarity:279/900 - (31%) Gaps:311/900 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LPEHELLELELDYGLAEPQR-TSLLQSSLILQFSQDYKHIPRITYFTCQKPHLQ-------TPNQ 72
            |.|..||::.:|.|.|:.|. ...|||.:||.:|.  |....|.:.......|.       .|:.
Zfish    58 LEEVLLLDMSVDDGDAKIQNLLKKLQSPVILLYST--KEEANIIFQVAHSVGLTGYGYTWIVPSL 120

  Fly    73 IPNAAEHRDAFAAKNFQLIKSLYESELFVRIVLLDVLAQSPTSGRPNRPGNGPTGGFSQTPSQAQ 137
            :...|:|                                        .|...|||..|      .
Zfish   121 VAGDADH----------------------------------------IPAEFPTGMIS------V 139

  Fly   138 SNSEWLEGVLRMEALRQIAVVDLACGAVSRRFLELASAKMLYSEKFHWLLIEDFAWHG---RTQT 199
            |..||..|   :||..:..|..:|          .|::.|:.....|.||..:  .||   :...
Zfish   140 SYDEWDYG---LEARVRDGVAVIA----------TATSTMMMDRGPHTLLKSE--CHGAPDKKSP 189

  Fly   200 AEGSGKRDDGEMEEEEPPGQQIQATDDEDLPSIESFLGGMNLYMNTELTLAKRMSEAAHYTLFDV 264
            ..|:.......:......|:.:..::|           |..::....:.|..:..:         
Zfish   190 MTGNNNEVLRYLMNVTFEGRNLSFSED-----------GYQMHPKLVIILLDKERQ--------- 234

  Fly   265 WNPGLNYGGHVNLTEIGSFTPTEGIQLHTW--FRTTSTVRRRMDMQHARVRCM-----VVVTNKN 322
            |:       .|...|.||.:    ::.|.|  |...|....|.| .|..:..:     |:|.:.:
Zfish   235 WD-------RVGKWENGSLS----MKYHVWPRFELYSGPEARED-DHLSIVTLEEAPFVIVEDVD 287

  Fly   323 -MTGTLM--------------------YYLTHTMSGHIDTMNRFNFNLLMAVRDMFNWTFVLSRT 366
             ::||.|                    .|:.....|       |..::|..:.....:|:.|...
Zfish   288 PLSGTCMRNTVPCRKQLKALNQTQDSAVYIKRCCKG-------FCIDILKKIAKNVKFTYDLYLV 345

  Fly   367 TSWGYVK--NGRFDGMIGALIRNETDIGGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQK 429
            |:..:.|  ||.::||:|.::.....:....:....||.:.||.:.....:....:......|..
Zfish   346 TNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVS 410

  Fly   430 DRIVFLQPFTNDVWILIVGCGVLTVFILWFLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQ 494
            .. .||:||:.||||:        :|::..|                                  
Zfish   411 PS-AFLEPFSADVWIM--------MFVMLLL---------------------------------- 432

  Fly   495 EQVEAPVRPITAVSVVVSKEKVEEKQEEYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPER 559
                     ::|::|.:           :|..:|:.    :.||       :.|  .::...|. 
Zfish   433 ---------VSAIAVFI-----------FEYFSPVG----YNRC-------LAD--GREAGGPS- 463

  Fly   560 VGLFLESVLFFVG--IICQQGLGFSTSF-------VSGRCIVITSLLFSFCIYQFYSASIVGTLL 615
                     |.:|  |....||.|:.|.       .:.:.:|.....|:......|:|::...::
Zfish   464 ---------FTIGKAIWLLWGLVFNNSVPVQNPRGTTSKIMVSVWAFFAVIFLASYTANLAAFMI 519

  Fly   616 MEKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDPVSMELYAKKITSVPTTK-ENEADEDEP 679
            .|:                                        |..:::.:...| :|..|...|
Zfish   520 QEE----------------------------------------YVDQVSGLSDKKFQNPNDFSPP 544

  Fly   680 -----VDPNPVSTDPAKSYRDIVHSHETGAHAKDNAASNWLDPETGLLRHLGFAFHVDVAAAYKI 739
                 |.......:...:||| :||:....|.: |........:||.|.    ||..|.|    :
Zfish   545 FRFGTVPNGSTERNIRNNYRD-MHSYMVKFHQR-NVVEALESLKTGKLD----AFIYDAA----V 599

  Fly   740 IAETFSEQDICDLTEV---SMFPPQKTVSIMQKNSPMRKVISYGLRRVTETGILTYHFNVW---- 797
            :.......:.|.|..:   .:|........:||:|..::.:...:.::...|.:.....:|    
Zfish   600 LNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI 664

  Fly   798 -HSRKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITLM-ILGTEILYSKWHNR 850
             |..|    .::.:|.|  |:|.::....:|..:.|::|: .:...:.|  ||.|
Zfish   665 CHHEK----NEVMSSQL--DVDNMAGVFYMLGAAMALSLITFIAEHVFY--WHMR 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 24/115 (21%)
Lig_chan 563..828 CDD:278489 46/287 (16%)
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 52/290 (18%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 83/543 (15%)
DUF4013 <389..478 CDD:315788 24/174 (14%)
NMDAR2_C 704..1417 CDD:313729 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591404
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.