DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir64a and LOC100331381

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_017207884.1 Gene:LOC100331381 / 100331381 -ID:- Length:1063 Species:Danio rerio


Alignment Length:595 Identity:104/595 - (17%)
Similarity:197/595 - (33%) Gaps:169/595 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 GGHVNLTEIGSFTPTEGIQLHTWFRTTSTVRRRMDMQHARVRCMVVVTNKNMTGTLMYYLTHTMS 336
            |||   .|||           .|:...:..   |:.....:.....:.||.:|.|.:....:.|.
Zfish   395 GGH---KEIG-----------VWYSNNTLA---MNSTSLDINTSETLANKTLTVTTILENPYVMR 442

  Fly   337 GH-------IDTMNRFNFNLLMAVRDMFNWTFVLSRTTSWGY---VKNGRFDGMIGALIRNETDI 391
            ..       .|....|..::|..:.|:..::|.:.......|   ..||.:.||:|.||..:.|:
Zfish   443 KENYQDFQGSDQYEGFCVDMLRELADILKFSFRIKLVDDGLYGAPEPNGSWTGMVGELINRKADL 507

  Fly   392 GGAPIFYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILIVGCGVLTVFI 456
            ..|......||.|.||.:....:.....::|.....:.....||.||:..||:.:: ...|.|..
Zfish   508 AVAGFTITSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSPAVWLFML-LAYLAVSC 571

  Fly   457 LWFLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQE 521
            :.||            :|.:.|                                           
Zfish   572 VLFL------------AARLSP------------------------------------------- 581

  Fly   522 EYEDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTSFV 586
             ||...|..       |:::....::::..        :|   .|:.|.:|...|||.......:
Zfish   582 -YEWYNPFP-------CWRERRDLLENQYT--------LG---NSLWFPIGGFMQQGSEIMPRAL 627

  Fly   587 SGRCIVITSLLFSFCIYQFYSASIVGTLLMEKPKT-IKTLSDLV-HSSLKVGMEDILYNRDYFLH 649
            |.||:......|:..|...|:|::...|.:::.:. |::..||. .::::.|.........:|::
Zfish   628 STRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESAEDLADQTNIQYGTIQGGSTMTFFMN 692

  Fly   650 TKDPVSMELYAKKITSVPTTKENEADEDEPVDPNPVSTDPAKSYRDIVHSHETGAHAKDNAASNW 714
            ::......::                                   :.::|.:.....|..     
Zfish   693 SRYQTYQRMW-----------------------------------NYMYSKQPSVFVKST----- 717

  Fly   715 LDPETGLLRHLG--FAFHVDVAAAYKIIAETFSEQD---ICDLTEVSMFPPQKTVSI-MQKNSPM 773
               |.|:.|.|.  :||         ::..|.:|..   .|:||::......|...| |...||.
Zfish   718 ---EEGIARVLNSKYAF---------LLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPF 770

  Fly   774 RKVISYGLRRVTETG---ILTYHFNVWHSRKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITL 835
            |..|:.|:.::.|..   ||...:  |...|  |:|:.:.....:.||.:....::|:....|.:
Zfish   771 RDEITLGILQLQENNRLEILKRRW--WEGGK--CLKEEDHRAKGLGMDNIGGIFVVLICGLIIAV 831

  Fly   836 MILGTEILYS 845
            .:...|.::|
Zfish   832 FVAIMEFVWS 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 28/116 (24%)
Lig_chan 563..828 CDD:278489 49/275 (18%)
LOC100331381XP_017207884.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.