DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir64a and LOC100149482

DIOPT Version :9

Sequence 1:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:661 Identity:114/661 - (17%)
Similarity:215/661 - (32%) Gaps:203/661 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LGGMNLYMNTELTLAKRMSEAAHYTLFDVWNPGLNYGGHVNLTEIGSFTPTEG------------ 288
            |||.:...:.|..||               ||.|         ::.|:||..|            
Zfish   372 LGGRDYSFSNEGYLA---------------NPFL---------DVISYTPGSGWEDVGWWENGVL 412

  Fly   289 -IQLHTWFRTTSTVRRRMDMQHARV-----RCMVVVTNKN-MTGTLM------------YYLTHT 334
             ::...|.|....::...|.||.||     |..|:|...: .:||.:            ..|...
Zfish   413 RLRYPAWSRYGPFLQPPDDAQHLRVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASALQEG 477

  Fly   335 MSGHIDTMNRFNFNLLMAVRDMFNWTFVLSRTTSWGYVK--NGRFDGMIGALIRNETDIGGAPIF 397
            ::........|..::|..:..:..:|:.|...|:..:.|  :|.::||:|.::....|:....:.
Zfish   478 VAPVKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAIGSLT 542

  Fly   398 YWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILI-VGC---GVLTVFILW 458
            ...||.:.:|.:.....:....:......|.... .||:|::..||::: |.|   ..:||||..
Zfish   543 INEERSEVVDFSVPFVETGISVMVSRSNGTVSPS-AFLEPYSPAVWVMMFVMCLTVVAVTVFIFE 606

  Fly   459 FLTTIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEY 523
            |.:.:.:......|    |..||:                         ...:.|          
Zfish   607 FFSPVGYNRSLQSG----KKAGGS-------------------------KFTIGK---------- 632

  Fly   524 EDSTPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTSFVSG 588
                     ::|                           .|.:::|...:..:...|     .:.
Zfish   633 ---------SIW---------------------------LLWALVFNNSVPVENPKG-----TTS 656

  Fly   589 RCIVITSLLFSFCIYQFYSASIVGTLLMEKPKTIKTLSDLVHSSLKVGMEDILYNRDYFLHTKDP 653
            :.:|:....|:......|:|::...::.|  :.|.|:|         |:.|     ..|.|    
Zfish   657 KIMVLVWAFFAVIFLASYTANLAAFMIQE--EYIDTVS---------GLSD-----KKFQH---- 701

  Fly   654 VSMELYAK-KITSVP--TTKENEADEDEPVDPNPVSTDPAKSYRDIVHSHETGAHAKDNAASNWL 715
             ..|.|.. |..:||  :|::|.......:....|..: .||..|.:...:||.          |
Zfish   702 -PTEQYPPLKFGTVPNGSTEKNIRSNYPDMHQYMVKYN-QKSVEDAISHLKTGK----------L 754

  Fly   716 DPETGLLRHLGFAFHVDVAAAYKIIAETFSEQDICDLTEVSMFPPQKTVSIMQKNSPMRKVISYG 780
            |           ||..| ||....:|.......:..:....:|........:.|||..::.:...
Zfish   755 D-----------AFIYD-AAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALIKNSRWKRPLDLA 807

  Fly   781 LRRVTETGILTYHFNVW-----HSRKPPCVKKIETSDLHVDMDTVSSALLILLFSYAITLMILGT 840
            |.::.....:.....:|     |:      .|||.....:|:|.::....:||.:..::|::...
Zfish   808 LLQLVGDDEIEMLERLWLSGICHN------DKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAW 866

  Fly   841 E-ILYSKWHNR 850
            | ::|  |..|
Zfish   867 EHLVY--WRLR 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:304360 25/119 (21%)
Lig_chan 563..828 CDD:278489 48/272 (18%)
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373 14/72 (19%)
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 85/522 (16%)
HisJ <487..>570 CDD:223904 14/82 (17%)
Lig_chan 585..857 CDD:278489 65/401 (16%)
NMDAR2_C 868..>900 CDD:287527 3/10 (30%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591532
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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