DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn4 and pfd-6

DIOPT Version :9

Sequence 1:NP_647961.1 Gene:Pfdn4 / 38615 FlyBaseID:FBgn0035603 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_492058.1 Gene:pfd-6 / 172474 WormBaseID:WBGene00009004 Length:126 Species:Caenorhabditis elegans


Alignment Length:96 Identity:21/96 - (21%)
Similarity:44/96 - (45%) Gaps:3/96 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EDQQRINRFAKHNARMDDFKAELETKRNELKSLEEALEEIELFDEDEDIPFLVGEVFLSHKLEKT 88
            |:..::....|...:....:.|:|.:..|.|:::   .|::|.:.|..:..|:|.|.:...||:.
 Worm     9 EEVNKLRTLEKDREKYFTSRQEMEMRLTESKNVK---AELDLMESDSKVYKLIGAVLVRQDLEEA 70

  Fly    89 QDMLKETKEQVLKEIAGVEAKAKVIKAEMDE 119
            :..:::..|.:..|...|||....|..:..|
 Worm    71 RSTVEKRLEFIDSETKRVEASISDISKKCTE 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn4NP_647961.1 Prefoldin_2 26..129 CDD:280154 20/94 (21%)
pfd-6NP_492058.1 Prefoldin_beta 7..111 CDD:238345 21/96 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1382
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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