DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1 and CYT1

DIOPT Version :9

Sequence 1:NP_001246637.1 Gene:Cyt-c1 / 38612 FlyBaseID:FBgn0035600 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_014708.1 Gene:CYT1 / 854231 SGDID:S000005591 Length:309 Species:Saccharomyces cerevisiae


Alignment Length:287 Identity:155/287 - (54%)
Similarity:203/287 - (70%) Gaps:13/287 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SSAGSWASGNKKLIGALGAITGGVGA-------LIYA---LEQSVQASGGEVHSPAQLWNHKGLF 83
            |:|...||.:.||...|  :|.||.|       |:||   ..:::.|:...:|:||..|:|.|.|
Yeast    20 STATGAASKSGKLTQKL--VTAGVAAAGITASTLLYADSLTAEAMTAAEHGLHAPAYAWSHNGPF 82

  Fly    84 DALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAEAEQITVKDGPDDTGNYYTR 148
            :..||.|:||||:||::||:||||:..:|:|.||||:||..|.:..||:....|.||:.||...|
Yeast    83 ETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKR 147

  Fly   149 PGKLSDYFPSPYPNEEAARAANNGAYPPDLSYIVSARKGGEDYIFSLLTGYHD-APAGVVLREGQ 212
            |||||||.|.|||||:||||||.||.|||||.||.||.||.||||||||||.| .||||.|..|.
Yeast   148 PGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGS 212

  Fly   213 YFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLAKDVATFLKWTSEPEHDDRKQLLIKVIGIL 277
            .:|||||||:|:||:||:::::|||||||.|.||:||||.|||.|.:|||||:||:|.:|.:.||
Yeast   213 NYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIIL 277

  Fly   278 GFLTVISYYIKRHKWSSLKSRKIVFVP 304
            ..|.::|.::|:.||:.:|:||.||.|
Yeast   278 SSLYLLSIWVKKFKWAGIKTRKFVFNP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1NP_001246637.1 CYT1 69..296 CDD:225413 134/227 (59%)
Cytochrom_C1 77..295 CDD:280350 131/218 (60%)
CYT1NP_014708.1 Cytochrom_C1 76..295 CDD:396646 131/218 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345191
Domainoid 1 1.000 284 1.000 Domainoid score I252
eggNOG 1 0.900 - - E1_COG2857
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55617
Inparanoid 1 1.050 309 1.000 Inparanoid score I478
Isobase 1 0.950 - 0 Normalized mean entropy S421
OMA 1 1.010 - - QHG54185
OrthoFinder 1 1.000 - - FOG0003553
OrthoInspector 1 1.000 - - otm46903
orthoMCL 1 0.900 - - OOG6_102032
Panther 1 1.100 - - LDO PTHR10266
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R278
SonicParanoid 1 1.000 - - X2430
TreeFam 1 0.960 - -
1615.740

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