DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1 and Cyc1

DIOPT Version :10

Sequence 1:NP_647958.1 Gene:Cyt-c1 / 38612 FlyBaseID:FBgn0035600 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_079843.1 Gene:Cyc1 / 66445 MGIID:1913695 Length:325 Species:Mus musculus


Alignment Length:319 Identity:187/319 - (58%)
Similarity:231/319 - (72%) Gaps:16/319 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AATLRRF----HGLRLL-KSAPAL-----SLQ------QAKNLSSAGSWASGNKKLIGALGAITG 50
            ||:|||.    .|:.|. .|||.|     |.|      ||.:|||....:.|.|.::.|||.:..
Mouse     5 AASLRRTVLGPRGVGLPGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGRKVMLSALGMLAA 69

  Fly    51 GVGALIYALEQSVQASGGEVHSPAQLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRN 115
            |...|..||..:|.||..|:|.|:..|:|:||..:|||.|:|||::|||||||:||||.|:|||:
Mouse    70 GGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRH 134

  Fly   116 LVGVTHTEAEAKAEAEQITVKDGPDDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSY 180
            ||||.:||.||||.||::.|:|||:|.|..:.||||||||||.||||.||||||||||.||||||
Mouse   135 LVGVCYTEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSY 199

  Fly   181 IVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQS 245
            ||.||.|||||:|||||||.:.|.||.||||.||||||||.||.||..:|.||:||:||||.|.|
Mouse   200 IVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYTEVLEYDDGTPATMS 264

  Fly   246 QLAKDVATFLKWTSEPEHDDRKQLLIKVIGILGFLTVISYYIKRHKWSSLKSRKIVFVP 304
            |:||||||||:|.||||||.||::.:|::.::|.|..::|.:||||||.|||||:.:.|
Mouse   265 QVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKLAYRP 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1NP_647958.1 Cytochrom_C1 77..295 CDD:426633 148/217 (68%)
Cyc1NP_079843.1 Cytochrom_C1 96..312 CDD:426633 146/215 (68%)

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