DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-c1 and cyc1

DIOPT Version :9

Sequence 1:NP_001246637.1 Gene:Cyt-c1 / 38612 FlyBaseID:FBgn0035600 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001032470.1 Gene:cyc1 / 564379 ZFINID:ZDB-GENE-031105-2 Length:307 Species:Danio rerio


Alignment Length:297 Identity:185/297 - (62%)
Similarity:218/297 - (73%) Gaps:6/297 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALEQSVQASGGEVHSPA 74
            |..||.::.|....:|.  .|..|...|.|..:..:|.:|.|...|...|:|||:||..|:|.|.
Zfish    13 GRTLLNTSKAFHTPRAS--MSFASLPKGKKIALTTIGVLTTGGAGLALMLQQSVKASDLELHPPT 75

  Fly    75 QLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAEAEQITVKDGP 139
            ..|:|.|...:|||.||||||:||||||||||||:|:|:||||||:|||.|.|..||:|.|.|||
Zfish    76 YPWSHGGFLSSLDHASVRRGYQVYKQVCSACHSMEYLAFRNLVGVSHTEDEVKTLAEEIEVVDGP 140

  Fly   140 DDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSYIVSARKGGEDYIFSLLTGYHDAPA 204
            ||.|..:|||||||||||.||.|.||||||||||.||||||||:||.|||||:|||||||.|.||
Zfish   141 DDNGEMFTRPGKLSDYFPKPYANPEAARAANNGALPPDLSYIVNARHGGEDYVFSLLTGYCDPPA 205

  Fly   205 GVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLAKDVATFLKWTSEPEHDDRKQL 269
            ||.||||.|:||||||.||.||..:||||:||:||||.|.||:||||.|||:|.:||||||||::
Zfish   206 GVSLREGLYYNPYFPGQAIGMAPPIYNEVLEYDDGTPATMSQVAKDVCTFLRWAAEPEHDDRKRM 270

  Fly   270 LIKVIGILG--FLTVISYYIKRHKWSSLKSRKIVFVP 304
            .:||  :||  .|..:.|||||||||.||||||.:.|
Zfish   271 GLKV--LLGGALLIPLIYYIKRHKWSVLKSRKIAYRP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1NP_001246637.1 CYT1 69..296 CDD:225413 159/228 (70%)
Cytochrom_C1 77..295 CDD:280350 156/219 (71%)
cyc1NP_001032470.1 CYT1 66..297 CDD:225413 161/232 (69%)
Cytochrom_C1 78..296 CDD:280350 156/219 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590048
Domainoid 1 1.000 331 1.000 Domainoid score I1128
eggNOG 1 0.900 - - E1_COG2857
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55617
Inparanoid 1 1.050 370 1.000 Inparanoid score I2087
OMA 1 1.010 - - QHG54185
OrthoDB 1 1.010 - - D439021at33208
OrthoFinder 1 1.000 - - FOG0003553
OrthoInspector 1 1.000 - - otm24321
orthoMCL 1 0.900 - - OOG6_102032
Panther 1 1.100 - - LDO PTHR10266
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R278
SonicParanoid 1 1.000 - - X2430
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.