DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-c1 and cyc1

DIOPT Version :10

Sequence 1:NP_647958.1 Gene:Cyt-c1 / 38612 FlyBaseID:FBgn0035600 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_989234.1 Gene:cyc1 / 394843 XenbaseID:XB-GENE-6455900 Length:309 Species:Xenopus tropicalis


Alignment Length:307 Identity:182/307 - (59%)
Similarity:227/307 - (73%) Gaps:3/307 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAA---TLRRFHGLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALEQS 62
            |||   .|||..|..:|:...|......:...|..:.:.|.|..:..||.:..|...|.:||.||
 Frog     1 MAAACLVLRRSLGGAVLQGGRAAWPVAPQANMSFSTLSRGRKVALSTLGILVAGGSGLAFALHQS 65

  Fly    63 VQASGGEVHSPAQLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAK 127
            |:||..|:|.|:..|:|.||..:|||.|:||||:||||||:|||||:|:|:|||:||:|||||||
 Frog    66 VKASELELHPPSYPWSHNGLLSSLDHASIRRGYQVYKQVCAACHSMEYLAFRNLIGVSHTEAEAK 130

  Fly   128 AEAEQITVKDGPDDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSYIVSARKGGEDYI 192
            |.||:..:.||||:.|..:|||||||||||.||||:|||||:||||.||||||||:||.|||||:
 Frog   131 ALAEEFEILDGPDENGEMFTRPGKLSDYFPKPYPNDEAARASNNGALPPDLSYIVNARHGGEDYV 195

  Fly   193 FSLLTGYHDAPAGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLAKDVATFLKW 257
            |||||||.|.||||.||||.|:||||||.|:.||..:||||:|::||||.|.||:||||.|||:|
 Frog   196 FSLLTGYCDPPAGVSLREGLYYNPYFPGQAVGMAPPIYNEVLEFDDGTPATMSQVAKDVCTFLRW 260

  Fly   258 TSEPEHDDRKQLLIKVIGILGFLTVISYYIKRHKWSSLKSRKIVFVP 304
            .||||||.||::.:||:.|...|..:.||:|||:||.||||||.:.|
 Frog   261 ASEPEHDQRKRMGLKVLMISSILIPLIYYMKRHRWSVLKSRKIAYRP 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1NP_647958.1 Cytochrom_C1 77..295 CDD:426633 149/217 (69%)
cyc1NP_989234.1 Cytochrom_C1 80..296 CDD:426633 147/215 (68%)

Return to query results.
Submit another query.